Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Achipteria_20coleoptrata_20[genbank_20GCA_5F000988765.1_202015-05- 06] 56,345 sequences; 88,443,889 total letters Query= NC_023717.1 Length=151924 Score E Sequences producing significant alignments: (Bits) Value seq54669 91.5 1e-13 seq13760 82.4 7e-11 >seq54669 Length=12211 Score = 91.5 bits (100), Expect = 1e-13 Identities = 121/168 (72%), Gaps = 0/168 (0%) Strand=Plus/Plus Query 121695 ATATACTGAGTTCCTGACAAATGCAAGGCTTCATCACGAGCAATTAACTCGATGATGTTG 121754 |||| ||| ||||| | | ||| | |||||||||||||| || |||| ||| || || Sbjct 9708 ATATGCTGTGTTCCGGCAAGATGTAGCGCTTCATCACGAGCGATCAACTTGATAATTTTA 9767 Query 121755 GTATTGCCCAGCATAACCCCACGCTCACCGAAAGCGAAGGAGCAGGCAAAGCTCACGTAG 121814 | ||| || ||| | |||| ||| | ||||| || || |||||||| ||||| || Sbjct 9768 GCATTACCTTCCATTAATTCACGTTCAGCAAAAGCAAACGAACAGGCAAAACTCACATAA 9827 Query 121815 AAGCGGATAGCTTCGAGTGCGTTGATATTGTGCAGGCACAGGTACAGC 121862 ||||| | |||||| | ||| |||| | | ||| || | |||||| Sbjct 9828 AAGCGAACAGCTTCTAATGCATTGACACTCATCAGACATAAATACAGC 9875 >seq13760 Length=57140 Score = 82.4 bits (90), Expect = 7e-11 Identities = 60/70 (86%), Gaps = 0/70 (0%) Strand=Plus/Plus Query 148141 TAGCTCAGTTGGTAGAGCAACTGATTTGTAATCAGAAGGTCGCGGGTTCGAACCCTGCAT 148200 |||||||||||||||||||||||| |||||||||| |||||| |||||||| ||| | Sbjct 18033 TAGCTCAGTTGGTAGAGCAACTGACTTGTAATCAGTAGGTCGAGGGTTCGACTCCTTCTG 18092 Query 148201 CCAGCACCAG 148210 | ||||||| Sbjct 18093 CTGGCACCAG 18102 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 485686483840800