Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Achipteria_20coleoptrata_20[genbank_20GCA_5F000988765.1_202015-05- 06] 56,345 sequences; 88,443,889 total letters Query= NC_023856.1 Length=152460 Score E Sequences producing significant alignments: (Bits) Value seq54669 111 2e-19 seq4872 84.2 2e-11 >seq54669 Length=12211 Score = 111 bits (122), Expect = 2e-19 Identities = 251/372 (67%), Gaps = 8/372 (2%) Strand=Plus/Minus Query 31500 GGCGTTCGTACCCCAACCCGCCAATTCAGTTCTTGTGTTCTTATCAAAACCGGTGACACT 31559 || || ||||| || ||||||||||| || |||||||| | || || || |||| | Sbjct 12211 GGTGTACGTACGCCTACCCGCCAATTTAGCTCTTGTGTATTGATAGAATGTGGGGACAGT 12152 Query 31560 TTGGACTCAATCAATGCTACAGCCAAAAGTATTGTTGATTATGTATCCAAACGCGCTGGG 31619 ||||| || |||||||| ||||| | || | | ||||| || | ||||| ||| Sbjct 12151 TTGGATTCTATCAATGCCACAGCAAGCGCAATCATAAAATATGTTTCGCAGCGCGCGGGG 12092 Query 31620 ATCGGATTTGATGTTGGAGCAATTCGTG-GCATCGGTAGCCCTATCCGAAAAGGTGAAAT 31678 || || || ||| ||| || |||| ||| ||||| || || | |||||| Sbjct 12091 ATTGGTATTAATGCTGGTCGCATCCGTGCGCA-AGGTAGTGGAATTCGTCATGGTGAAGC 12033 Query 31679 GGTGCACACAGGCCTGGTTCC-TTTCATAA--AATATCTGACTGGGGCATTAAAGTCTTG 31735 | || || || |||| ||| |||| | | || ||||| || |||| ||||| Sbjct 12032 TTTTCATACCGGTTGTATTCCGTTTTATAAACACTTTCAGACTGCGG---TAAAATCTTG 11976 Query 31736 CTCTCAAGGCGGTATTCGTGGCGGATCAGCAACTTGCTATATCCCTATCTGGCATTATCA 31795 |||||||| ||| | ||||| || ||||||| | | | | || | ||||||| | Sbjct 11975 TTCTCAAGGAGGTGTGCGTGGTGGTGCAGCAACGTTATTTTTTCCCCTGTGGCATTTAGA 11916 Query 31796 ATTTGATGATGTTGTGGTCCTGAAGAACAACCGTGGTCTTGAAGAGAACCGTGAACGCCG 31855 | || || | |||| | || || ||||||||| ||||||| || |||| |||| Sbjct 11915 GATAGAAAATCTGTTGGTATTAAAAAATAACCGTGGTGTTGAAGATAATCGTGTTCGCCA 11856 Query 31856 TATCGACTATGG 31867 ||| || || || Sbjct 11855 TATGGATTACGG 11844 >seq4872 Length=25388 Score = 84.2 bits (92), Expect = 2e-11 Identities = 64/76 (84%), Gaps = 0/76 (0%) Strand=Plus/Minus Query 96736 CAATTTGGCGACGATGGCAGGACTTGAACCTGCGACATACGATTTAACAGACCGCCGTTC 96795 ||| ||||| | |||| ||||| ||||| |||||||||| ||||||| ||||||||| Sbjct 1091 CAAGTTGGCTCCTCTGGCTGGACTCGAACCAGCGACATACGGATTAACAGTCCGCCGTTC 1032 Query 96796 TACCGACTGAACTACA 96811 |||| ||||||||||| Sbjct 1031 TACCAACTGAACTACA 1016 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 487400475804000