Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Achipteria_20coleoptrata_20[genbank_20GCA_5F000988765.1_202015-05- 06] 56,345 sequences; 88,443,889 total letters Query= NC_024121.1 Length=167266 Score E Sequences producing significant alignments: (Bits) Value seq54669 140 3e-28 >seq54669 Length=12211 Score = 140 bits (154), Expect = 3e-28 Identities = 197/277 (71%), Gaps = 0/277 (0%) Strand=Plus/Plus Query 139719 TTGATTTGCACACCGTAATCCAAGTGACGAATGCGGTTCTCTTCAACGCCTTTGTTGTTT 139778 || ||||| || |||||||||| || |||| || || |||||||| || ||| ||| Sbjct 11832 TTAATTTGTACCCCGTAATCCATATGGCGAACACGATTATCTTCAACACCACGGTTATTT 11891 Query 139779 TTCAGAACAAGCAAGTTTTCAACTTCCAAGTGCCAGATTGGATAGTACAACGTCGCTGCA 139838 || | || | || ||||| | || || ||||| | ||| | | ||||| |||||| Sbjct 11892 TTTAATACCAACAGATTTTCTATCTCTAAATGCCACAGGGGAAAAAATAACGTTGCTGCA 11951 Query 139839 CCACCACGAACACCACCTTGAGAACAGGATTTAACCGCAGTCTGGAAGTGTTTCCAGAAA 139898 |||||||| ||||| ||||||||||| ||||| ||||||||||| |||||||| | || Sbjct 11952 CCACCACGCACACCTCCTTGAGAACAAGATTTTACCGCAGTCTGAAAGTGTTTATAAAAC 12011 Query 139899 GGAATTACGCCAGTGTGTTTGACTTCACCGAAACCAATTTTTGAGCCTTCAGCTCGGATT 139958 ||||| || || || ||||||| || |||| |||| || ||||| Sbjct 12012 GGAATACAACCGGTATGAAAAGCTTCACCATGACGAATTCCACTACCTTGCGCACGGATG 12071 Query 139959 CGACCTGCGTTGATGCCGATTCCAGCTCGTTTAGAAA 139995 ||||| || || || || || || || || | |||| Sbjct 12072 CGACCAGCATTAATACCAATCCCCGCGCGCTGCGAAA 12108 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 534746306041200