Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Achipteria_20coleoptrata_20[genbank_20GCA_5F000988765.1_202015-05- 06] 56,345 sequences; 88,443,889 total letters Query= NC_024451.1 Length=220222 Score E Sequences producing significant alignments: (Bits) Value seq9067 118 1e-21 >seq9067 Length=28331 Score = 118 bits (130), Expect = 1e-21 Identities = 210/303 (69%), Gaps = 10/303 (3%) Strand=Plus/Plus Query 140425 TACACACAAATAATATTGTTCACCGAGACATTAAACTCGGAAACATCATTT---ATGACA 140481 |||| | || ||||| |||||| ||||| | ||||||||||| || | | || | | Sbjct 5267 TACATAAAAGAAATATCGTTCACAGAGACCTCAAACTCGGAAATATGGTCTTCAATAAGA 5326 Query 140482 CAAAGTTAAAAACTAGTAAACTATCTAATTTTTGTTTAGGAAAACACCTTTCA--AGTGA 140539 | | || || | | | | ||| || ||||||||||| || ||| | | ||| Sbjct 5327 GGACGCGAAGAATCACTTTAAT---TAACTTCTGTTTAGGAAAGCA--TTTGATTAATGA 5381 Query 140540 AAACGATCTTTTAAAAGATCAACGCGGGTCTCCCGCATATATTTCTCCGGATGTTATCAG 140599 ||| ||| | | | || ||| | ||||||||||| || || ||| |||||| |||| Sbjct 5382 AAATGATTTACTCACTGACCAAAGAGGGTCTCCCGCTTACATCAGTCCCGATGTTCTCAG 5441 Query 140600 CGGTAAACCATATTTAGGTAAACCGTCTGATATGTGGGCGCTTGGAGTAACATTGTATAC 140659 ||||||||| ||||| ||||||||||| || ||||| | || ||| |||||||| Sbjct 5442 CGGTAAACCTTATTTGGGTAAACCGTCGGACTGTTGGGCTTTGGGTGTAGTGTTGTATAC 5501 Query 140660 CATGTTGTTTGGGCAATTTCCATTTTATGATGCGTCTCCAACAGAGCTCTTTAGAAAAAT 140719 ||| | || || || || || |||||||| | || |||| | || ||||||| Sbjct 5502 AATGCTTTTCGGTCAGTTCCCGTTTTATGACTCTGTGCCGCAAGAGTTGTTCCGAAAAAT 5561 Query 140720 AAA 140722 ||| Sbjct 5562 AAA 5564 Score = 87.8 bits (96), Expect = 3e-12 Identities = 116/161 (72%), Gaps = 0/161 (0%) Strand=Plus/Plus Query 127428 GAGGATCACCGGCATACATCTCCCCAGAAGTTATATCAGGTAAAAAATATTTAGCAAAAC 127487 |||| || || || |||||| || || ||| | |||||| ||||| | |||| Sbjct 5405 GAGGGTCTCCCGCTTACATCAGTCCCGATGTTCTCAGCGGTAAACCTTATTTGGGTAAAC 5464 Query 127488 CGTCAGATGTTTGGGCTATAGGAGTTATTTTTTATACAATGCTTTACGGACAATTTCCAT 127547 |||| || ||||||| | || || | || ||||||||||||| ||| || || || | Sbjct 5465 CGTCGGACTGTTGGGCTTTGGGTGTAGTGTTGTATACAATGCTTTTCGGTCAGTTCCCGT 5524 Query 127548 TTTATGACTCTAAACCAAAAGAATTGTTTAGAAAAATTAAA 127588 ||||||||||| || |||| ||||| ||||||| ||| Sbjct 5525 TTTATGACTCTGTGCCGCAAGAGTTGTTCCGAAAAATAAAA 5565 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 704086153808400