Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Achipteria_20coleoptrata_20[genbank_20GCA_5F000988765.1_202015-05- 06] 56,345 sequences; 88,443,889 total letters Query= NC_024697.1 Length=370920 Score E Sequences producing significant alignments: (Bits) Value seq2342 87.8 4e-12 >seq2342 Length=5817 Score = 87.8 bits (96), Expect = 4e-12 Identities = 172/252 (68%), Gaps = 2/252 (1%) Strand=Plus/Minus Query 304889 CAATATCATATTGCAACATTAATGGATAATGAAATTGCTGGAATTATGCAGGCATCTCAA 304948 ||||| ||| | || || | | |||||||| ||| | || ||| |||| ||| Sbjct 4399 CAATACCATGTGGCCACTCTCGTTGATAATGACATTCCAGGCATTCCTAAGGCTCAACAA 4340 Query 304949 AGATCTGGCAGACCTTTAAAGGGTATTAGGCAACGCATTAAAGGTAAA-GAGGGTCGTAT 305007 | |||||| |||| ||||| |||| ||| | ||||||| ||| |||||||| || Sbjct 4339 AAATCTGGTCGACCCCTAAAGTCAATTAAACAAAG-ATTAAAGTCAAAAGAGGGTCGAAT 4281 Query 305008 TCGAGGTAATCTAATGGGAAAACGTGTTGATTTTAGTGCAAGAAGTGTAATCACACCTGA 305067 |||||||||| |||||||||||||| || || ||| | | ||| || || || || Sbjct 4280 CAGAGGTAATCTTATGGGAAAACGTGTGGACTTCTCTGCGCGTACTGTCATTACTCCCGA 4221 Query 305068 TTCTCAAATTAGTCTTCATGAATTAGGAGTTCCAATTGAAATTGCTTTAAAACTAACATT 305127 | | | | || | |||| | |||||||| | || ||| || || ||||| Sbjct 4220 TCCCAATCTCCGTATCGATGAGGTGGGAGTTCCGCGTTCTATCGCTCAGAACCTGACATT 4161 Query 305128 TCCAGAGAAAGT 305139 |||||| | ||| Sbjct 4160 TCCAGAAATAGT 4149 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1185956015732545