Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Achipteria_20coleoptrata_20[genbank_20GCA_5F000988765.1_202015-05- 06] 56,345 sequences; 88,443,889 total letters Query= NC_024794.1 Length=167318 Score E Sequences producing significant alignments: (Bits) Value seq54669 147 2e-30 >seq54669 Length=12211 Score = 147 bits (162), Expect = 2e-30 Identities = 240/346 (69%), Gaps = 0/346 (0%) Strand=Plus/Plus Query 141837 GGGCTAAATAAAGTAATATAATCATTTTTACCAAGGCGTTCCATCATAAGGTCATTAATC 141896 || ||||||| ||| || | || ||||| | | || | ||||| | |||||| Sbjct 11778 GGACTAAATAGAGTTATCTCTTCGTTTTTTACTAAACGCTGATACATAAATTTATTAATT 11837 Query 141897 TGAATTCCGTAGTCCATATGTCGAATACGGTTTTCATCCACACCTTTGTTATTTTTCAGA 141956 || | ||||| |||||||| |||| ||| || || || ||||| ||||||||| | Sbjct 11838 TGTACCCCGTAATCCATATGGCGAACACGATTATCTTCAACACCACGGTTATTTTTTAAT 11897 Query 141957 ACTAATAGGTTCTCTACTTCTAAGTGCCACATCGGATAATACGCTGTAGCAGCACCGCCG 142016 || || || || |||| ||||| ||||||| ||| || | || || ||||| || Sbjct 11898 ACCAACAGATTTTCTATCTCTAAATGCCACAGGGGAAAAAATAACGTTGCTGCACCACCA 11957 Query 142017 CGAATACCACCTTGAGAACAAGATTTTACTGCAGTTTGGAAATGTTTCCAGAATGGAATA 142076 || | ||| |||||||||||||||||||| ||||| || || ||||| | || |||||| Sbjct 11958 CGCACACCTCCTTGAGAACAAGATTTTACCGCAGTCTGAAAGTGTTTATAAAACGGAATA 12017 Query 142077 ACACCTGTATGTCGAACTTCACCCATACCGATCTTAGAACCTTCTGCACGAAGCATGCCA 142136 ||| ||||| | ||||||| || || | ||||| ||||| | ||| Sbjct 12018 CAACCGGTATGAAAAGCTTCACCATGACGAATTCCACTACCTTGCGCACGGATGCGACCA 12077 Query 142137 ACGTTGATACCGATACCAGCTCGTTTAGAAATATATTCGATAATTG 142182 | || ||||| || || || || | |||| ||||| || |||| Sbjct 12078 GCATTAATACCAATCCCCGCGCGCTGCGAAACATATTTTATGATTG 12123 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 534912588843600