Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Achipteria_20coleoptrata_20[genbank_20GCA_5F000988765.1_202015-05- 06] 56,345 sequences; 88,443,889 total letters Query= NC_025414.1 Length=178171 Score E Sequences producing significant alignments: (Bits) Value seq54669 212 7e-50 >seq54669 Length=12211 Score = 212 bits (234), Expect = 7e-50 Identities = 316/446 (71%), Gaps = 7/446 (2%) Strand=Plus/Minus Query 41198 GGTGTGCGTACTCCTACGCGTCAGTTTTCCAGTTGCGTAGTGATTGAATCAGGTGATTCC 41257 ||||| ||||| ||||| || || ||| | ||| ||| |||| |||| || || Sbjct 12211 GGTGTACGTACGCCTACCCGCCAATTTAGCTCTTGTGTATTGATAGAATGTGGGGACAGT 12152 Query 41258 CTGGGTTCTCTGAATGCTGTAACCTCTGCGATCGTGAAGTATATTTCACAACGTGCTGGT 41317 ||| |||| | ||||| | | || ||| | || ||| |||| || || || || Sbjct 12151 TTGGATTCTATCAATGCCACAGCAAGCGCAATCATAAAATATGTTTCGCAGCGCGCGGGG 12092 Query 41318 ATCGGTGTTAATGCTGGACACATTCG--CGCAATGGGTTCTAAAATCCGTGGTGGTGAAG 41375 || ||| |||||||||| | ||| || ||||| ||| | ||| ||| |||||||| Sbjct 12091 ATTGGTATTAATGCTGGTCGCATCCGTGCGCAA--GGTAGTGGAATTCGTCATGGTGAAG 12034 Query 41376 CAGTACATACAGGCGTGATCCCGTTCTGGAAACATATTCAGACAGCGGTTAAATCCTGTT 41435 | | ||||| || || ||||| | ||||| ||||||| ||||| ||||| |||| Sbjct 12033 CTTTTCATACCGGTTGTATTCCGTTTTATAAACACTTTCAGACTGCGGTAAAATCTTGTT 11974 Query 41436 CACAAGGTGGCGTTCGTGGTGGTGCTGCAACGTTGTATTATCCGATCTGGCATTTGGAAG 41495 | ||||| || || ||||||||||| |||||||| | || ||| | |||||||| || Sbjct 11973 CTCAAGGAGGTGTGCGTGGTGGTGCAGCAACGTTATTTTTTCCCCTGTGGCATTTAGAGA 11914 Query 41496 TTGAAAACCTGCTGGTTCTGAAAAACAACAAAGGTGTTGAGAATAACCGCATTCGTCACC 41555 | ||||| ||| |||| | ||||| ||| |||||||| |||| || |||| || Sbjct 11913 TAGAAAATCTGTTGGTATTAAAAAATAACCGTGGTGTTGAAGATAATCGTGTTCGCCATA 11854 Query 41556 TGGATTATGGCGTTCAGCTTAACGATTTGATGTATAAGCGTTTAATCAATAACGATTACA 41615 ||||||| || || || |||| | || |||||| |||||||| | || ||||| | | Sbjct 11853 TGGATTACGGGGTACAAATTAATAAATTTATGTATCAGCGTTTAGTAAAAAACGAAGAGA 11794 Query 41616 TCACACTGTTCAGCC---CTGACGTT 41638 | || || || || | |||||||| Sbjct 11793 TAACTCTATTTAGTCCATCTGACGTT 11768 Score = 89.7 bits (98), Expect = 6e-13 Identities = 136/194 (70%), Gaps = 0/194 (0%) Strand=Plus/Minus Query 42944 CAAAAACATCGCGTATTCGAAACTTTGACTGAAAAACAACTATCATTCTTCTGGCGACCG 43003 ||||||||| | | || |||| |||| ||||||||| || || || || ||||| ||| Sbjct 10360 CAAAAACATATCATGTTTGAAAAATTGATTGAAAAACAGCTTTCCTTTTTTTGGCGGCCG 10301 Query 43004 GAAGAAGTGGATCTGTCGATCGACCGTATGCAGTATGCAAAAATGCCGGAACACGAGAAA 43063 ||||| | ||| | | || | || | ||||| | || || || || ||| Sbjct 10300 GAAGAGATTGATGTTGCACGTGATAGAATCGACTATGCTGCTTTACCTGAGCATGAAAAA 10241 Query 43064 ATCATTTTTGATTCTAACCTGCAATATCAAACCCTGTTAGATACCATTCAGGGACGTGGC 43123 | |||||| | ||| | |||||||||||||||||||| | || |||||||| || Sbjct 10240 AATATTTTTATTAGTAATTTAAAATATCAAACCCTGTTAGATTCAATCCAGGGACGCAGC 10181 Query 43124 CCTAACCTGGCGTT 43137 |||||| | || || Sbjct 10180 CCTAACATTGCTTT 10167 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 569617728352200