Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Achipteria_20coleoptrata_20[genbank_20GCA_5F000988765.1_202015-05- 06] 56,345 sequences; 88,443,889 total letters Query= NC_025425.1 Length=163424 Score E Sequences producing significant alignments: (Bits) Value seq54669 208 8e-49 seq40599 98.7 1e-15 >seq54669 Length=12211 Score = 208 bits (230), Expect = 8e-49 Identities = 307/435 (71%), Gaps = 0/435 (0%) Strand=Plus/Plus Query 135306 TGGACTAAACAGAGTAATGTAATCCCGTTTAAGGAATCGCTCTACCATCAGGTTATTAAT 135365 ||||||||| ||||| || | || ||| | || |||| ||| | |||||||| Sbjct 11777 TGGACTAAATAGAGTTATCTCTTCGTTTTTTACTAAACGCTGATACATAAATTTATTAAT 11836 Query 135366 CTGTACGCCGTAGTCAAGATGGCGAATGCGGTTATCTTCCACGCCCTTATTGTTCTTTAA 135425 ||||| ||||| || | |||||||| || |||||||| || || || || ||||| Sbjct 11837 TTGTACCCCGTAATCCATATGGCGAACACGATTATCTTCAACACCACGGTTATTTTTTAA 11896 Query 135426 CACAATCAGACTTTCAAACTCTAAATGCCACATTGGGTAATAGAGAGTCGCCGCCCCGCC 135485 || | |||| |||| | |||||||||||||| || || | | || || || || || Sbjct 11897 TACCAACAGATTTTCTATCTCTAAATGCCACAGGGGAAAAAATAACGTTGCTGCACCACC 11956 Query 135486 ACGAATACCGCCTTGTGAGCATGACTTAACGGCAGTCTGAAAATGTTTCCAGAATGGGAT 135545 ||| | ||| ||||| || || || || || ||||||||||| ||||| | || || || Sbjct 11957 ACGCACACCTCCTTGAGAACAAGATTTTACCGCAGTCTGAAAGTGTTTATAAAACGGAAT 12016 Query 135546 AACGCCAGTATGACGAACTTCACCATGCCCGATCTTAGATCCTTCCGCGCGAATCATGCC 135605 | || |||||| | |||||||||| | || | |||| ||| || || || Sbjct 12017 ACAACCGGTATGAAAAGCTTCACCATGACGAATTCCACTACCTTGCGCACGGATGCGACC 12076 Query 135606 AGCGTTGATACCGATACCCGCACGCTTGCTAATATACTTGATGATTGCATTTGCTGTTTC 135665 ||| || ||||| || ||||| |||| || ||| || |||||||| ||||||| | Sbjct 12077 AGCATTAATACCAATCCCCGCGCGCTGCGAAACATATTTTATGATTGCGCTTGCTGTGGC 12136 Query 135666 GTTGATGCCCTGCAATGAGTCATCACTTTCAATCACCACACACGAACTAAATTGGCGTGT 135725 ||||| | ||| ||| ||| ||| |||| ||||| || ||||||||||| || Sbjct 12137 ATTGATAGAATCCAAACTGTCCCCACATTCTATCAATACACAAGAGCTAAATTGGCGGGT 12196 Query 135726 TGGGGTACGCACACC 135740 || ||||| ||||| Sbjct 12197 AGGCGTACGTACACC 12211 >seq40599 Length=28396 Score = 98.7 bits (108), Expect = 1e-15 Identities = 129/179 (72%), Gaps = 0/179 (0%) Strand=Plus/Minus Query 53988 GATTCGGTAAAGGTACGCGCGATAACGTCACGCTGCTGGTCTGGAGTCAGACTATTGAAG 54047 |||| ||||||||||||| || || || |||||||| ||| ||| | |||||| Sbjct 4625 GATTTTGTAAAGGTACGCGTAATCACATCTCGCTGCTGTTCTTTAGTTAATGAATTGAAA 4566 Query 54048 CGCACTGCGTAACCAGAAACGCGAATTGTAAGCTGCGGGTACTTCTCAGGATGTTCAACA 54107 || || || || ||||| || || || |||||||| || || | || |||| || | | Sbjct 4565 CGGACGGCATAGCCAGACACTCGTATCGTAAGCTGTGGATATTCTTCTGGATTATCCATA 4506 Query 54108 GCGTCCAGCAACATTTCTCGTAACAATACGTTAACATTCAAATGCTGGCCACCTTCGAC 54166 || | ||| ||||| ||| | || || |||| ||| |||||||| || ||||| || Sbjct 4505 GCCTTCAGTAACATCTCTTGATTCATGACATTAAGATTTAAATGCTGTCCCCCTTCAAC 4447 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 522460565140800