Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Achipteria_20coleoptrata_20[genbank_20GCA_5F000988765.1_202015-05- 06] 56,345 sequences; 88,443,889 total letters Query= NC_025446.1 Length=157308 Score E Sequences producing significant alignments: (Bits) Value seq54669 111 2e-19 seq11509 87.8 2e-12 seq4872 87.8 2e-12 >seq54669 Length=12211 Score = 111 bits (122), Expect = 2e-19 Identities = 251/372 (67%), Gaps = 8/372 (2%) Strand=Plus/Minus Query 4060 GGCGTTCGTACCCCAACCCGCCAATTCAGTTCTTGTGTTCTTATCAAAACCGGTGACACT 4119 || || ||||| || ||||||||||| || |||||||| | || || || |||| | Sbjct 12211 GGTGTACGTACGCCTACCCGCCAATTTAGCTCTTGTGTATTGATAGAATGTGGGGACAGT 12152 Query 4120 TTGGACTCAATCAATGCTACAGCCAAAAGTATTGTTGATTATGTATCCAAACGCGCTGGG 4179 ||||| || |||||||| ||||| | || | | ||||| || | ||||| ||| Sbjct 12151 TTGGATTCTATCAATGCCACAGCAAGCGCAATCATAAAATATGTTTCGCAGCGCGCGGGG 12092 Query 4180 ATCGGATTTGATGTCGGAGCAATTCGTG-GCATCGGTAGCCCTATCCGAAAAGGTGAAAT 4238 || || || ||| || || |||| ||| ||||| || || | |||||| Sbjct 12091 ATTGGTATTAATGCTGGTCGCATCCGTGCGCA-AGGTAGTGGAATTCGTCATGGTGAAGC 12033 Query 4239 GGTGCACACAGGTCTGGTTCC-TTTCATAA--AATATCTGACTGGGGCATTAAAGTCTTG 4295 | || || ||| |||| ||| |||| | | || ||||| || |||| ||||| Sbjct 12032 TTTTCATACCGGTTGTATTCCGTTTTATAAACACTTTCAGACTGCGG---TAAAATCTTG 11976 Query 4296 CTCTCAAGGCGGTATTCGTGGCGGATCAGCAACTTGCTATATCCCTATCTGGCATTATCA 4355 |||||||| ||| | ||||| || ||||||| | | | | || | ||||||| | Sbjct 11975 TTCTCAAGGAGGTGTGCGTGGTGGTGCAGCAACGTTATTTTTTCCCCTGTGGCATTTAGA 11916 Query 4356 ATTTGATGATGTTGTGGTCCTGAAGAACAACCGTGGTCTTGAAGAGAACCGTGAACGCCG 4415 | || || | |||| | || || ||||||||| ||||||| || |||| |||| Sbjct 11915 GATAGAAAATCTGTTGGTATTAAAAAATAACCGTGGTGTTGAAGATAATCGTGTTCGCCA 11856 Query 4416 TATCGACTATGG 4427 ||| || || || Sbjct 11855 TATGGATTACGG 11844 >seq11509 Length=51200 Score = 87.8 bits (96), Expect = 2e-12 Identities = 67/78 (86%), Gaps = 1/78 (1%) Strand=Plus/Minus Query 76787 TTGGTGACCCTGGCTGGACTTGAACCAGCGACCAATCGATTATGAGTCGACTGCTCTAAC 76846 |||||| ||| |||||| | |||||||||||| | ||||||||||||| ||||||||| Sbjct 32004 TTGGTGGCCCCTGCTGGATTCGAACCAGCGACCCAGCGATTATGAGTCGCTTGCTCTAAC 31945 Query 76847 C-ACTGAGCTACGGGGCC 76863 | ||||||||| |||||| Sbjct 31944 CAACTGAGCTAAGGGGCC 31927 >seq4872 Length=25388 Score = 87.8 bits (96), Expect = 2e-12 Identities = 65/76 (86%), Gaps = 0/76 (0%) Strand=Plus/Minus Query 76388 CAATTTGGCGACGATGGCAGGACTTGAACCTGCGACATATGGATTAACAGTCCACCGTTC 76447 ||| ||||| | |||| ||||| ||||| |||||||| ||||||||||||| |||||| Sbjct 1091 CAAGTTGGCTCCTCTGGCTGGACTCGAACCAGCGACATACGGATTAACAGTCCGCCGTTC 1032 Query 76448 TACCGACTGAACTACA 76463 |||| ||||||||||| Sbjct 1031 TACCAACTGAACTACA 1016 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 502903149381600