Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Achipteria_20coleoptrata_20[genbank_20GCA_5F000988765.1_202015-05- 06] 56,345 sequences; 88,443,889 total letters Query= NC_025829.1 Length=164999 Score E Sequences producing significant alignments: (Bits) Value seq54669 149 7e-31 seq13760 95.1 1e-14 >seq54669 Length=12211 Score = 149 bits (164), Expect = 7e-31 Identities = 235/337 (70%), Gaps = 0/337 (0%) Strand=Plus/Plus Query 143761 GGACTGAACAAAGTAATGTAATCATTCTTTCCGAATCGTTCCATCATTAGGTCATTCAGT 143820 ||||| || | ||| || | || || ||| | || || | ||| | | ||| | | Sbjct 11778 GGACTAAATAGAGTTATCTCTTCGTTTTTTACTAAACGCTGATACATAAATTTATTAATT 11837 Query 143821 TGAACGCCATAATCCATATGACGGATACGGTTTTCTTCTACACCTTTGTTATTTTTCAAA 143880 || || || ||||||||||| || | ||| || ||||| ||||| ||||||||| || Sbjct 11838 TGTACCCCGTAATCCATATGGCGAACACGATTATCTTCAACACCACGGTTATTTTTTAAT 11897 Query 143881 ACGAGAAGATTTTCAACTTCCAAATGCCAAATAGGATAATAAGCAGTAGCAGCGCCGCCA 143940 || | |||||||| | || |||||||| | ||| || | || || || || ||| Sbjct 11898 ACCAACAGATTTTCTATCTCTAAATGCCACAGGGGAAAAAATAACGTTGCTGCACCACCA 11957 Query 143941 CGAATTCCACCCTGTGAACATGATTTAACTGCAGTCTGAAAATGTTTCCAAAAAGGAATA 144000 || | || || || ||||| ||||| || ||||||||||| ||||| |||| |||||| Sbjct 11958 CGCACACCTCCTTGAGAACAAGATTTTACCGCAGTCTGAAAGTGTTTATAAAACGGAATA 12017 Query 144001 ACACCAGTATGACGCACTTCACCCATTCCAATCTTAGAACCTTCGGCACGAATCATACCA 144060 ||| |||||| ||||||| | ||| | ||||| ||||| || |||| Sbjct 12018 CAACCGGTATGAAAAGCTTCACCATGACGAATTCCACTACCTTGCGCACGGATGCGACCA 12077 Query 144061 ACGTTAATACCAATTCCAGCGCGTTTGGAGATATATT 144097 | ||||||||||| || ||||| | || | ||||| Sbjct 12078 GCATTAATACCAATCCCCGCGCGCTGCGAAACATATT 12114 >seq13760 Length=57140 Score = 95.1 bits (104), Expect = 1e-14 Identities = 66/75 (88%), Gaps = 0/75 (0%) Strand=Plus/Minus Query 74141 TTGGAGCGGATAATGAGAATCGAACTCACATCATCAGATTGGAAGTCTGAGGTAATGCCA 74200 ||||||||| |||| ||||||||| ||||||||||| ||||||| |||||||||||||| Sbjct 18360 TTGGAGCGGGCAATGGGAATCGAACCCACATCATCAGCTTGGAAGGCTGAGGTAATGCCA 18301 Query 74201 TTATACGATATCCGC 74215 |||||| || |||| Sbjct 18300 TTATACCATGCCCGC 18286 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 527497015405800