Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Achipteria_20coleoptrata_20[genbank_20GCA_5F000988765.1_202015-05- 06] 56,345 sequences; 88,443,889 total letters Query= NC_025960.1 Length=148981 Score E Sequences producing significant alignments: (Bits) Value seq17432 102 8e-17 seq11840 102 8e-17 seq669 93.3 4e-14 seq214 93.3 4e-14 >seq17432 Length=31749 Score = 102 bits (112), Expect = 8e-17 Identities = 148/209 (71%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 131915 ACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATCTTCG 131974 |||||||| | | ||||||| |||||||||||||| ||| | || || ||||| Sbjct 23954 ACCAAATGAAGGGTTGACTCCTTTTGAATGTTGTAATCGGAGAGAGTGCGGCCGTCTTCT 23895 Query 131975 AGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATCGGTA 132034 || ||||| || | | |||| || | |||||| || ||||| ||||| ||||| || | Sbjct 23894 AGTTGTTTGCCCGCAAAGATCAGTCTCTGTTGGTCGGGAGGGATGCCCTCTTTGTCCTGA 23835 Query 132035 ATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGTTTTA 132094 || || |||| | || | || |||| |||||||| || | || | ||||| Sbjct 23834 ATCTTGGCCTTCACGTTCTCAATGGTGTCGGAGGGCTCCACCTCAAGGGTAATGGTTTTT 23775 Query 132095 CCAGTCAGAGTTTTTATGAAAATCTGCAT 132123 || |||| ||||| | |||||| ||||| Sbjct 23774 CCGGTCAACGTTTTCACGAAAATTTGCAT 23746 Score = 93.3 bits (102), Expect = 4e-14 Identities = 146/209 (70%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 131915 ACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATCTTCG 131974 |||||||| | | | ||||| ||||||||||| || ||| | || ||| ||||| Sbjct 24574 ACCAAATGAAGGGTCGACTCCTTTTGAATGTTATAATCGGAAAGAGTGCGCCCGTCTTCC 24515 Query 131975 AGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATCGGTA 132034 | |||||| |||| |||| || | ||||| || ||||| |||||||||||||| Sbjct 24514 AACTGTTTGCCGGCGAAGATCAGTCTTTGTTGGTCGGGAGGGATGCCTTCTTTATCTTGG 24455 Query 132035 ATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGTTTTA 132094 ||||| || | | || | || |||| |||||||| || | || | ||||| Sbjct 24454 ATTTTGGCCTTAACGTTCTCAATGGTGTCGGAGGGCTCCACCTCAAGGGTTATGGTTTTT 24395 Query 132095 CCAGTCAGAGTTTTTATGAAAATCTGCAT 132123 || |||||||| || | || || ||||| Sbjct 24394 CCGGTCAGAGTCTTAACAAAGATTTGCAT 24366 Score = 93.3 bits (102), Expect = 4e-14 Identities = 146/209 (70%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 131915 ACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATCTTCG 131974 |||||||| | | ||||| |||||||| || ||||| | || || ||||| Sbjct 24802 ACCAAATGAAGAGTCGACTCCTTTTGAATATTATAGTCAGAGAGTGTTCGGCCGTCTTCT 24743 Query 131975 AGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATCGGTA 132034 || ||||| |||| |||| |||||||||||||| ||||| || || ||||| || | Sbjct 24742 AGTTGTTTGCCGGCGAAGATAAGACGCTGTTGATCCGGAGGAATACCCTCTTTGTCCTGA 24683 Query 132035 ATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGTTTTA 132094 ||||| |||| | || | || || | |||||||||||| | || | || || Sbjct 24682 ATTTTCGCCTTCACGTTCTCAATGGTGTCCGACGGCTCCACTTCCAAAGTGATGGTCTTT 24623 Query 132095 CCAGTCAGAGTTTTTATGAAAATCTGCAT 132123 || |||| ||||| | ||| || ||||| Sbjct 24622 CCGGTCAATGTTTTGACGAATATTTGCAT 24594 Score = 84.2 bits (92), Expect = 2e-11 Identities = 144/209 (69%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 131915 ACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATCTTCG 131974 |||||||| | | ||||| |||||||| || || || | || || ||||| Sbjct 24346 ACCAAATGAAGAGTCGACTCCTTTTGAATATTATAATCAGAGAGTGTTCGGCCGTCTTCT 24287 Query 131975 AGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATCGGTA 132034 || ||||| || | | |||| || | ||||||||| ||||| || |||||||| || Sbjct 24286 AGTTGTTTGCCCGCAAAGATCAGTCTCTGTTGATCCGGAGGAATACCTTCTTTGTCTTGG 24227 Query 132035 ATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGTTTTA 132094 ||||| || | | || | || || | |||||||||||| | || | || || Sbjct 24226 ATTTTGGCCTTTACGTTCTCAATGGTGTCCGACGGCTCCACTTCCAAAGTAATTGTCTTT 24167 Query 132095 CCAGTCAGAGTTTTTATGAAAATCTGCAT 132123 || |||||||| || | ||| |||||||| Sbjct 24166 CCGGTCAGAGTCTTGACGAATATCTGCAT 24138 >seq11840 Length=1854 Score = 102 bits (112), Expect = 8e-17 Identities = 441/687 (64%), Gaps = 14/687 (2%) Strand=Plus/Plus Query 146899 ACTTGAAACTCGCCCGCCAGCACACGTCTGAGATACACATTGCTAGTGAAAGGCTCAAAA 146958 || |||||||| || | || || || | | ||| | ||| |||||| | ||||| | Sbjct 726 ACCTGAAACTCTCCGGAGAGGACTCGACGGGAATATATATTACTAGTGTAGGGCTCTATC 785 Query 146959 GACTCATTATTGCCTAATATTTGGGCCGTGGTTGCGGTAGGCATGTACGCCACC--AACA 147016 |||||||| ||||||||||| || ||||| | ||||| ||||| |||| | || | Sbjct 786 GACTCATTGTTGCCTAATATCTGTGCCGTAGAAGCGGTCGGCATCGGAGCCAACGTAAGA 845 Query 147017 ATGAATTTCGCAGACCGTACGCACGGATGTTGTCCTTCAAAGTTTG--CCAGTCCCACAT 147074 | ||| || | || || ||| || ||||| ||||| | ||| | ||| | Sbjct 846 CT--ATTACGTACTCCATATTTGGCGATCTTTTCCTT--AAGTTCGGCCCAATTCCAGAG 901 Query 147075 CGACGAGGGCGTCACGTTCCACATGTCGTACTGGAGCACTCCTCGACTGGCGGGACTGCC 147134 | ||||| || |||||| ||||| || || | ||| | | | || || Sbjct 902 TTCAGTTGGCGTTCGGTCCCACATATCGTATTGAAGAATACCTTTAGAGACCGGCGAACC 961 Query 147135 AGCGAACGTAGTGTA-GCTTCCGTCGCGCTGCGCCAATTCACAGCTTGCCTCGAGCGCTC 147193 | | || || | | || | | | ||||||||||| || ||||| | || | Sbjct 962 TTCATATGTCTCATAAGGTCCCAACTCTTTA-GCCAATTCACAACTGGCCTCCAAAGCGC 1020 Query 147194 CATAGTATATGGTTTCGGCGATTTGTTTGTTTAGGACGGTCGCTTCTTCGCTCTCGTAAG 147253 | || |||||||| || || || | || || |||||||| || || | | Sbjct 1021 CGTAATATATGGTCTCAAAAATCTGGATATTAAGTCGTTTCGCTTCTGGACTTTCAAAGG 1080 Query 147254 GCATACGCAGAAGCACAAAGGCATCGGCCAAACCCTGGATACCGACGCCGATAGGTCGAT 147313 || ||||| ||| | ||| |||||||||||||| | || | ||||| ||||| | Sbjct 1081 GCTGACGCATAAGAATAAAACAGTCGGCCAAACCCTGAACTCCAATACCGATGGGTCGGT 1140 Query 147314 GCTTTTCGTTGCTGCGCTTCGCGCTCGCTATGGGATAGTGGTTGCGATCAATAATCTTGT 147373 | | | || ||||| | || | ||||||| ||| | ||||| || || | Sbjct 1141 GTCTCTTATTAGAGCGCTCTGTTTCCGGCACAGGATAGTAGTTAAGGTCAATGATTTTAT 1200 Query 147374 TGAGGTTACGCACTACAACTTTAGTTATTGTTTTGAGTTTCTCGAAATCATAAGTCCCGT 147433 |||| || | | |||||||| | | |||||||||| | ||||| ||| | | Sbjct 1201 TGAGATTTCTTGTGATAACTTTAGCCACTTCTTTGAGTTTCGCAAAATCG-AAGGACAG- 1258 Query 147434 CTTCGACACGT--ACGCATTGGTTCACGGCGATAGACGCCAGATTGCAGACGGCCGTCTC 147491 || | || ||| || | |||| || || ||||||| ||||||||| || |||| Sbjct 1259 CTCCCTTTTGTTGACGAATCGATTCAAAGCAATTGACGCCAAATTGCAGACTGCGATCTC 1318 Query 147492 TTCGGCGTCGCTGTACTGCACGATTTCGGCGCACAGGTTGCTGCATTTTATGACTCCCAA 147551 || | ||||| | ||||| | ||| | ||| ||| || ||| |||||| Sbjct 1319 ATCTTTGGACGAGTACTCAATTATTTCTGTGCATAAGTTCGAGCACTTAATGGTTCCCAA 1378 Query 147552 ATTTTGCTGATTGCTTTTCCGATTGCA 147578 |||||| ||||| || |||||||| Sbjct 1379 ATTTTGTTGATTTGACTTTCGATTGCA 1405 Score = 102 bits (112), Expect = 8e-17 Identities = 178/253 (70%), Gaps = 12/253 (5%) Strand=Plus/Plus Query 147681 GTTTTCGTACCGCTCGTACAACCGCTCAAACTCGTCGCCGTAGCAATCGGCAAGGCCGGG 147740 |||||| || || || || || ||||| || ||||| | || ||| ||| ||||| Sbjct 1563 GTTTTCATATTTTTCATATAATCGTTCAAATTCTTCGCCCCAACAGTCGTGAAGTCCGGG 1622 Query 147741 ACACTGATGCGGACACATCAGCGACCACATGTCGTCCGCGTTAACGCGTCGCATAAACAG 147800 ||||| || ||||||||||| |||||||| | ||| || | ||||| ||||||||||| Sbjct 1623 ACACTCGTGTGGACACATCAGTGACCACATTTGGTCTGCCTCTACGCGACGCATAAACAG 1682 Query 147801 ATCCGGCACCCACAGCGCGTACATAAGATCGC--GCGCTTTGCAATCCTCGGCGCCCATG 147858 ||||| | ||| || | || | ||||| | || ||| || || || | || || Sbjct 1683 GTCCGGAATCCAAAGGCCATAAAACAGATCTCTGGCTCTTAGC--TCTTCTGATCCGGTG 1740 Query 147859 TTGCGTTTC---AAAT-TAAGCACGCTATAGATGTCGGCGTGCCAGGGTTCAATGTAGAC 147914 || |||| |||| |||| || | | | ||| |||||||| || || | ||| | Sbjct 1741 TT---TTTCCTTAAATCTAAGAACTGGA-ACACGTCTGCGTGCCACGGCTCCAGGTATAT 1796 Query 147915 GGCCAGCGCACCT 147927 ||| | ||||||| Sbjct 1797 GGCAAACGCACCT 1809 >seq669 Length=42814 Score = 93.3 bits (102), Expect = 4e-14 Identities = 146/209 (70%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 131915 ACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATCTTCG 131974 || ||||| | | ||||||||||||| |||||||| || | || || || || Sbjct 31861 ACTAAATGAAGGGTTGACTCTTTTTGGATGTTGTAATCAGAGAGAGTGCGGCCGTCCTCT 31920 Query 131975 AGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATCGGTA 132034 | |||||| || | | |||| || | ||||||||| ||||| |||||||| || || | Sbjct 31921 AACTGTTTGCCCGCAAAGATAAGTCTCTGTTGATCCGGAGGAATGCCTTCCTTGTCCTGA 31980 Query 132035 ATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGTTTTA 132094 || ||| || | | ||| | ||||||| | ||||||||| | || | || || Sbjct 31981 ATCTTTGCCTTAACGTTTTCGATGGTATCGGAGGCCTCCACTTCCAAAGTAATTGTCTTT 32040 Query 132095 CCAGTCAGAGTTTTTATGAAAATCTGCAT 132123 || || || ||||| | ||| || ||||| Sbjct 32041 CCGGTGAGGGTTTTCACGAATATTTGCAT 32069 Score = 84.2 bits (92), Expect = 2e-11 Identities = 150/219 (68%), Gaps = 0/219 (0%) Strand=Plus/Plus Query 131905 CAAGCGCAAAACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGTACG 131964 ||| || | ||||||||| | | ||||| || ||||||||||| || | || || Sbjct 31623 CAAACGAAGAACCAAATGGAGAGTCGACTCCTTCTGAATGTTGTAATCAGAGAGAGTGCG 31682 Query 131965 CGAATCTTCGAGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCCTTC 132024 || || | |||||| || | | |||| || | ||||||||| ||||| || ||||| Sbjct 31683 GCCGTCCTCTAACTGTTTGCCCGCAAAGATAAGTCTCTGTTGATCCGGAGGAATACCTTC 31742 Query 132025 TTTATCGGTAATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGACCGT 132084 || || ||| ||| |||| | ||| | ||||| | | ||||||||| | || Sbjct 31743 CTTGTCCTGAATCTTTGCCTTCACGTTTTCGATGGTATCCGAAGCCTCCACTTCCAAAGT 31802 Query 132085 CAGCGTTTTACCAGTCAGAGTTTTTATGAAAATCTGCAT 132123 | || || || || || || || | ||| |||||||| Sbjct 31803 AATGGTCTTTCCGGTGAGGGTCTTCACGAATATCTGCAT 31841 >seq214 Length=17119 Score = 93.3 bits (102), Expect = 4e-14 Identities = 146/209 (70%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 131915 ACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATCTTCG 131974 |||||||| | | | ||||| ||||| |||||||| ||||| | || | ||||| Sbjct 974 ACCAAATGAAGGGTCGACTCCTTTTGGATGTTGTAATCGCTAAGAGTTCTGCCGTCTTCT 1033 Query 131975 AGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATCGGTA 132034 | ||||| || | | |||| | ||||| ||||| ||||||||||| || || || | Sbjct 1034 AATTGTTTGCCAGCAAAGATCAACCGCTGCTGATCCGGAGGTATGCCCTCCTTGTCCTGA 1093 Query 132035 ATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGTTTTA 132094 || ||| || | | || | ||||||| | |||||||| || | || | || ||| Sbjct 1094 ATCTTTGCCTTTACATTCTCAATAGTATCGCTGGGCTCCACCTCAAGAGTGATGGTCTTA 1153 Query 132095 CCAGTCAGAGTTTTTATGAAAATCTGCAT 132123 || |||| || || | ||| || ||||| Sbjct 1154 CCCGTCAACGTCTTGACGAAGATTTGCAT 1182 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 476275516774200