Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Achipteria_20coleoptrata_20[genbank_20GCA_5F000988765.1_202015-05- 06] 56,345 sequences; 88,443,889 total letters Query= NC_026511.1 Length=140913 Score E Sequences producing significant alignments: (Bits) Value seq38498 149 6e-31 seq214 138 1e-27 seq17432 116 3e-21 seq669 114 1e-20 >seq38498 Length=6817 Score = 149 bits (164), Expect = 6e-31 Identities = 236/333 (71%), Gaps = 8/333 (2%) Strand=Plus/Minus Query 44104 TAGAGACGGCCTCCACCCATGATCCTTTGTGGAACGCTGCCCAAACACAACTGTTGCGAG 44163 |||||| ||| || || || | ||||||||| | || || | |||| || ||| Sbjct 5586 TAGAGAGGGCTGAGACTCACGACCAGTTGTGGAACTCCGCTCAGAGACAAATGACAAGAG 5527 Query 44164 AAGGTAAAATGCACCAATACATGCGTATGTATTGGTGCAAGAAGATATTGGAGTGGTCGG 44223 | || |||||||| | ||||| ||||||||| ||||||||| | |||||| | Sbjct 5526 ATGGCAAAATGCATGGCTTTATGCGAATGTATTGGGCAAAGAAGATACTCGAGTGGACAC 5467 Query 44224 AAGATGCGCAAACCGCGCTCG--TTCATGCCATCTATCTGAACGACAAGTACAGTTTGGA 44281 || | || ||||||| ||| || || | ||||||| |||||| ||||| Sbjct 5466 AAACACCAGAACAGGCGCTCGAATTC--GCTATTCTTTTGAACGATAAGTACGAATTGGA 5409 Query 44282 CGGTCGCGACCCCAACGGGTACGTAGGATGTATGTGGTCCATTTGCGGTGTCCACGA-CA 44340 ||| ||||||||||||||||| || || ||||||||||| || || ||| | ||||| || Sbjct 5408 CGGACGCGACCCCAACGGGTATGTCGGCTGTATGTGGTCTATATGTGGTATTCACGATCA 5349 Query 44341 GGGCGTGGC-GAGAGCTACCCATCTACGGCAAAGTGCGCTACATGAACTACAACGGTTGC 44399 ||| ||| || || || | | ||||||| | || |||||||||||||| || || Sbjct 5348 GGGATGGGCTGAAAG--GCCGGTGTTCGGCAAAATTCGTTACATGAACTACAAGGGATGT 5291 Query 44400 GTCAGAAAGTTTGATGTAAAAACCTATATTAAT 44432 | | ||||||||||| || || |||||| Sbjct 5290 GAGCGCAAGTTTGATGTCAATCAATACATTAAT 5258 >seq214 Length=17119 Score = 138 bits (152), Expect = 1e-27 Identities = 164/220 (75%), Gaps = 2/220 (1%) Strand=Plus/Plus Query 35522 CTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCCAAG-GTTCGCTC 35580 |||| ||||||||| | || ||||||||| ||||||||||| || ||| |||| | Sbjct 968 CTCAGCACCAAATGAAGGGTCGACTCCTTTTGGATGTTGTAATC-GCTAAGAGTTCTGCC 1026 Query 35581 GTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTT 35640 ||| || | || || || ||||| |||||||||||||| |||| ||| | || |||||| Sbjct 1027 GTCTTCTAATTGTTTGCCAGCAAAGATCAACCGCTGCTGATCCGGAGGTATGCCCTCCTT 1086 Query 35641 GTCCATGATCTTTTGCTTCAGAGTTGCCACCGTGTCGCTCGATTCCACCTCCACCGTGAT 35700 |||| |||||| ||| | | | | | || ||||| | |||||||| | ||||| Sbjct 1087 GTCCTGAATCTTTGCCTTTACATTCTCAATAGTATCGCTGGGCTCCACCTCAAGAGTGAT 1146 Query 35701 CGTTTTACCCGTCAAAGTTTTCACAAATATCTGCATTCTG 35740 || ||||||||||| || || || || || |||||| || Sbjct 1147 GGTCTTACCCGTCAACGTCTTGACGAAGATTTGCATTTTG 1186 >seq17432 Length=31749 Score = 116 bits (128), Expect = 3e-21 Identities = 154/214 (72%), Gaps = 0/214 (0%) Strand=Plus/Minus Query 35528 ACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCC 35587 |||||||| | || ||||||||||||||||||||||| | || || |||| || Sbjct 23954 ACCAAATGAAGGGTTGACTCCTTTTGAATGTTGTAATCGGAGAGAGTGCGGCCGTCTTCT 23895 Query 35588 AGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATG 35647 || || || |||||||| |||| | ||| ||||| | ||| | || ||| |||||| Sbjct 23894 AGTTGTTTGCCCGCAAAGATCAGTCTCTGTTGGTCGGGAGGGATGCCCTCTTTGTCCTGA 23835 Query 35648 ATCTTTTGCTTCAGAGTTGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTA 35707 ||||| ||||| | | | |||||| | |||||||| | || || ||||| Sbjct 23834 ATCTTGGCCTTCACGTTCTCAATGGTGTCGGAGGGCTCCACCTCAAGGGTAATGGTTTTT 23775 Query 35708 CCCGTCAAAGTTTTCACAAATATCTGCATTCTGT 35741 || ||||| |||||||| || || |||||| ||| Sbjct 23774 CCGGTCAACGTTTTCACGAAAATTTGCATTTTGT 23741 Score = 107 bits (118), Expect = 2e-18 Identities = 151/212 (71%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 35527 CACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTC 35586 ||||||||| | || |||||||||||| ||||| |||| | || ||| |||| || Sbjct 25031 CACCAAATGAAGGGTCGACTCCTTTTGAATATTGTAGTCGGAAAGAGTGCGCCCGTCTTC 24972 Query 35587 CAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCAT 35646 ||| || || || || || ||||| || ||||| |||| ||||| | || ||||| Sbjct 24971 CAGTTGTTTGCCAGCGAAGATCAATCGTTGCTGATCCGGAGGAATCCCTTCTTTGTCTTG 24912 Query 35647 GATCTTTTGCTTCAGAGTTGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTT 35706 ||||| ||| | | | | | ||||| || ||||| |||| ||||| || || Sbjct 24911 AATCTTAGCCTTTACATTCTCGATGGTGTCCGACGGCTCCACTTCCAAAGTGATGGTCTT 24852 Query 35707 ACCCGTCAAAGTTTTCACAAATATCTGCATTC 35738 || ||||| || ||||| ||||| ||||||| Sbjct 24851 TCCGGTCAATGTCTTCACGAATATTTGCATTC 24820 Score = 91.5 bits (100), Expect = 1e-13 Identities = 149/212 (70%), Gaps = 2/212 (1%) Strand=Plus/Minus Query 35528 ACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCC 35587 |||||||| | || |||||||||||| || || || | | ||||| |||| || Sbjct 24802 ACCAAATGAAGAGTCGACTCCTTTTGAATATTATAGTCAGAGAGTGTTCGGCCGTCTTCT 24743 Query 35588 AGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATG 35647 || || || || || || || | ||||| || |||| ||||| | ||| |||||| || Sbjct 24742 AGTTGTTTGCCGGCGAAGATAAGACGCTGTTGATCCGGAGGAATACCCTCTTTGTCC-TG 24684 Query 35648 ATCTTTTG-CTTCAGAGTTGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTT 35706 | ||| | ||||| | | | ||||| || ||||| |||| ||||| || || Sbjct 24683 AATTTTCGCCTTCACGTTCTCAATGGTGTCCGACGGCTCCACTTCCAAAGTGATGGTCTT 24624 Query 35707 ACCCGTCAAAGTTTTCACAAATATCTGCATTC 35738 || ||||| ||||| || ||||| ||||||| Sbjct 24623 TCCGGTCAATGTTTTGACGAATATTTGCATTC 24592 Score = 87.8 bits (96), Expect = 2e-12 Identities = 146/211 (69%), Gaps = 0/211 (0%) Strand=Plus/Minus Query 35528 ACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCC 35587 |||||||| | || |||||||||||| || ||||| | | ||||| |||| || Sbjct 24346 ACCAAATGAAGAGTCGACTCCTTTTGAATATTATAATCAGAGAGTGTTCGGCCGTCTTCT 24287 Query 35588 AGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATG 35647 || || || |||||||| |||| | ||| || |||| ||||| | || ||||| | Sbjct 24286 AGTTGTTTGCCCGCAAAGATCAGTCTCTGTTGATCCGGAGGAATACCTTCTTTGTCTTGG 24227 Query 35648 ATCTTTTGCTTCAGAGTTGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTA 35707 || || ||| | | | | ||||| || ||||| |||| || || || || Sbjct 24226 ATTTTGGCCTTTACGTTCTCAATGGTGTCCGACGGCTCCACTTCCAAAGTAATTGTCTTT 24167 Query 35708 CCCGTCAAAGTTTTCACAAATATCTGCATTC 35738 || |||| ||| || || ||||||||||||| Sbjct 24166 CCGGTCAGAGTCTTGACGAATATCTGCATTC 24136 Score = 87.8 bits (96), Expect = 2e-12 Identities = 148/212 (70%), Gaps = 2/212 (1%) Strand=Plus/Minus Query 35528 ACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCC 35587 |||||||| | || ||||||||||||||| ||||||| | || ||| |||| ||| Sbjct 24574 ACCAAATGAAGGGTCGACTCCTTTTGAATGTTATAATCGGAAAGAGTGCGCCCGTCTTCC 24515 Query 35588 AGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATG 35647 | ||| || || || || |||| | || ||||| | ||| | || || || || | Sbjct 24514 AACTGTTTGCCGGCGAAGATCAGTCTTTGTTGGTCGGGAGGGATGCCTTCTTTATCTTGG 24455 Query 35648 ATCTTTTGCTTCAGAGTT-GCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTT 35706 || ||| || | | ||| | | |||||| | |||||||| | || || ||||| Sbjct 24454 AT-TTTGGCCTTAACGTTCTCAATGGTGTCGGAGGGCTCCACCTCAAGGGTTATGGTTTT 24396 Query 35707 ACCCGTCAAAGTTTTCACAAATATCTGCATTC 35738 || |||| ||| || ||||| || ||||||| Sbjct 24395 TCCGGTCAGAGTCTTAACAAAGATTTGCATTC 24364 >seq669 Length=42814 Score = 114 bits (126), Expect = 1e-20 Identities = 141/193 (73%), Gaps = 0/193 (0%) Strand=Plus/Plus Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604 |||||| |||||||||||||| | | || || |||| || | ||| || |||||||| Sbjct 32332 CTCCTTCTGAATGTTGTAATCAGAGAGAGTGCGTCCGTCTTCTAACTGTTTGCCCGCAAA 32391 Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664 |||||| | |||||| |||| ||||| || || |||||| |||||| ||| | | | Sbjct 32392 TATCAATCTCTGCTGATCCGGAGGAATGCCTTCTTTGTCCTGAATCTTTGCCTTTACATT 32451 Query 35665 TGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCAC 35724 | | | ||||| | || ||||| | ||||| || || || || | |||||||| Sbjct 32452 TTCGATAGTGTCAGAGGGCTCGACCTCAAGAGTGATAGTCTTTCCGGTGAGGGTTTTCAC 32511 Query 35725 AAATATCTGCATT 35737 |||||| |||||| Sbjct 32512 AAATATTTGCATT 32524 Score = 93.3 bits (102), Expect = 4e-14 Identities = 147/211 (70%), Gaps = 0/211 (0%) Strand=Plus/Plus Query 35528 ACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCC 35587 |||||||| | || |||||| |||||||||||||| | | || || |||| || Sbjct 31633 ACCAAATGGAGAGTCGACTCCTTCTGAATGTTGTAATCAGAGAGAGTGCGGCCGTCCTCT 31692 Query 35588 AGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATG 35647 | ||| || |||||||| || | | ||| || |||| ||||| | ||||||||| Sbjct 31693 AACTGTTTGCCCGCAAAGATAAGTCTCTGTTGATCCGGAGGAATACCTTCCTTGTCCTGA 31752 Query 35648 ATCTTTTGCTTCAGAGTTGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTA 35707 |||||| ||||| || | | || || | ||||| |||| || || || || Sbjct 31753 ATCTTTGCCTTCACGTTTTCGATGGTATCCGAAGCCTCCACTTCCAAAGTAATGGTCTTT 31812 Query 35708 CCCGTCAAAGTTTTCACAAATATCTGCATTC 35738 || || | || ||||| ||||||||||||| Sbjct 31813 CCGGTGAGGGTCTTCACGAATATCTGCATTC 31843 Score = 89.7 bits (98), Expect = 5e-13 Identities = 136/194 (70%), Gaps = 0/194 (0%) Strand=Plus/Plus Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604 ||| ||||| ||||||||||| | | || || |||| || | ||| || |||||||| Sbjct 31878 CTCTTTTTGGATGTTGTAATCAGAGAGAGTGCGGCCGTCCTCTAACTGTTTGCCCGCAAA 31937 Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664 || | | ||| || |||| ||||| || ||||||||| |||||| ||| | | Sbjct 31938 GATAAGTCTCTGTTGATCCGGAGGAATGCCTTCCTTGTCCTGAATCTTTGCCTTAACGTT 31997 Query 35665 TGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCAC 35724 | | | || ||| | ||||| |||| || || || || || || | |||||||| Sbjct 31998 TTCGATGGTATCGGAGGCCTCCACTTCCAAAGTAATTGTCTTTCCGGTGAGGGTTTTCAC 32057 Query 35725 AAATATCTGCATTC 35738 ||||| ||||||| Sbjct 32058 GAATATTTGCATTC 32071 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 450476100432600