Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Achipteria_20coleoptrata_20[genbank_20GCA_5F000988765.1_202015-05- 06] 56,345 sequences; 88,443,889 total letters Query= NC_027331.1 Length=170341 Score E Sequences producing significant alignments: (Bits) Value seq54669 118 1e-21 >seq54669 Length=12211 Score = 118 bits (130), Expect = 1e-21 Identities = 286/432 (66%), Gaps = 6/432 (1%) Strand=Plus/Plus Query 143072 TGGACTGAACAGAGTTATGTATTCATCTTTGCCAAGACGTTCCATCATCAGGTCGTTGAT 143131 |||||| || |||||||| | ||| | ||| | | ||| | ||| | | || || Sbjct 11777 TGGACTAAATAGAGTTATCTCTTCGTTTTTTACTAAACGCTGATACATAAATTTATTAAT 11836 Query 143132 TTGAAGACCATAGTCCAGGTGACGAATTCGGTTTTCATCTACGCCTTTGTTGTTCTTAAG 143191 ||| | || || |||| || |||| || || || || || || ||| || || | Sbjct 11837 TTGTACCCCGTAATCCATATGGCGAACACGATTATCTTCAACACCACGGTTATTTTTTAA 11896 Query 143192 TACGAGGAGATTCTCGACTTCAAGATGCCAAATTGGATAGTACAATGTTGCGGCACCACC 143251 ||| | ||||| || | || | |||||| | ||| | | || ||||| |||||||| Sbjct 11897 TACCAACAGATTTTCTATCTCTAAATGCCACAGGGGAAAAAATAACGTTGCTGCACCACC 11956 Query 143252 ACGAACTCCGCCTTGGGAACAGGATTTAACTGCAGTTTGGAAGTGTTTCCAGAAAGGAAT 143311 ||| || || ||||| ||||| ||||| || ||||| || |||||||| | || ||||| Sbjct 11957 ACGCACACCTCCTTGAGAACAAGATTTTACCGCAGTCTGAAAGTGTTTATAAAACGGAAT 12016 Query 143312 AACTCCAGTATGCTTGACTTCACCGTTTCCGATTTTTGAACCTTCTGCACGCAACATCCC 143371 | || ||||| ||||||| | | ||| ||||| ||||| | || Sbjct 12017 ACAACCGGTATGAAAAGCTTCACCATGACGAATTCCACTACCTTGCGCACGGATGCGACC 12076 Query 143372 CGCGTTAATGCCAATACCTGCACGCTTACTGATATACTCAATAATGCTTGCACTGGCTTT 143431 || ||||| ||||| || || |||| | ||| | | ||| |||| || ||| | Sbjct 12077 AGCATTAATACCAATCCCCGCGCGCTGCGAAACATATT---TTATGATTGCGCTTGCTGT 12133 Query 143432 G---TTAATTGACTTAAGTGAGTCACCAGCTTCAATAACAACACAAGAGCTAAACTGACG 143488 | || || || | | ||| ||| ||| || | |||||||||||||| || || Sbjct 12134 GGCATTGATAGAATCCAAACTGTCCCCACATTCTATCAATACACAAGAGCTAAATTGGCG 12193 Query 143489 AGTCGGTGTACG 143500 || || ||||| Sbjct 12194 GGTAGGCGTACG 12205 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 544579375606200