Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Achipteria_20coleoptrata_20[genbank_20GCA_5F000988765.1_202015-05- 06] 56,345 sequences; 88,443,889 total letters Query= NC_027339.1 Length=38389 Score E Sequences producing significant alignments: (Bits) Value seq55467 513 3e-141 seq54837 196 1e-45 seq55013 168 2e-37 seq36486 145 2e-30 seq55042 141 2e-29 seq56058 118 3e-22 >seq55467 Length=2484 Score = 513 bits (568), Expect = 3e-141 Identities = 810/1151 (70%), Gaps = 17/1151 (1%) Strand=Plus/Plus Query 1071 AGGTTAACGCCTCAAACATGAACCGTCCGGAGGATGGCGCGCGGTTTGAACCGCTGATCG 1130 ||||||| ||||| ||||| |||||||| ||||| || || || || || || || | Sbjct 1 AGGTTAATGCCTCCAACATAAACCGTCCCATCGATGGGGCCCGTTTCGAGCCACTAATTG 60 Query 1131 GTAACCCCGGTGATGGTTCATCACCCCACTGTGCCGTGGTGGATGAATATCACGAGCACG 1190 | |||||||| ||||| | || || || |||| | | ||||||| || || |||| Sbjct 61 GCAACCCCGGCGATGGGGCTTCTCCTCATCTTGCCATTATCGATGAATTCCATGAACACG 120 Query 1191 CCAC---CGATGCGCTTTATACCACGATGCTTACCGGGATGGGCGCGCGACGTCAGCCAC 1247 | | || |||||| ||| ||| | ||||| |||||||| || | || || | Sbjct 121 AAAATAGCAAT---CTTTATCACACAATGTTGACCGGTATGGGCGCCCGGCAGCAACCGC 177 Query 1248 TGATGTGGGCCATCACCACCGCCGGGTACAACATTGAGGGGCCGTGCTACGACAAGCGGC 1307 | || ||| | || || ||||| | |||| || || || || || |||||||| | Sbjct 178 TTATCTGGAGTGTGACGACAGCCGGTAATGACATCGAAGGTCCCTGTTATGACAAGCGCC 237 Query 1308 GGGGAGGTATCGAGATGCTCAAC--GGTTCGGTACCCAACGATGAACTGTTCGGGATCAT 1365 ||| || || || ||||| | | ||| || |||||||| ||| | || ||| | || Sbjct 238 GGGAAGTCATTGATATGCTAACCCAGGTA--GTGCCCAACGACGAATTATTTGGGTTAAT 295 Query 1366 CTATACCGTTGACGAAGGCGATGACTGGACCGACCCGCAGGTGCTGGAAAAAGCCAATCC 1425 || ||| | || || || || || |||||| | || | || ||||||||||| Sbjct 296 TTACACCCTCGATGAGGGAGAGGATTGGACCCAGCCAGCCGCCCTCAGCAAAGCCAATCC 355 Query 1426 AAATATTGGCGTGTCGGTTTATCGCGAATTTTTGTTAAGTCAGCAGCAGCGTGCGAAAAA 1485 || || ||||| || |||| | || ||| || |||| || || || || || | || Sbjct 356 CAACATGGGCGTCTCTATTTACCCTGATTTTCTGCTAAGCCAACAACAACGAGCCATCAA 415 Query 1486 TAACGCCCGTCTGGCAAACGTCTTTAAAACAAAACACCTCAATATCTGGGTGTCGGCGCG 1545 || ||| | | || |||| ||||||||| ||||||||||||||||||||||| || || Sbjct 416 CAATGCCAGACAAGCCAACGCCTTTAAAACCAAACACCTCAATATCTGGGTGTCAGCACG 475 Query 1546 TTCGGCGTATTTCAACCTGGTGAGCTGGCAGAGCT-GCGAGGATAAATCACTGACCCTTG 1604 |||||| | |||||| |||||| ||||| | ||| | || || | ||||| | | Sbjct 476 TTCGGCTTTCTTCAACATGGTGAACTGGC-GCGCTTGTGAAGACACCAGCCTGACTTTGG 534 Query 1605 AGCAGTTCGAGGGGCAGCCGTGCATTCTGGCCTTTGACCTGGCGCGTAAGCTGGATATGA 1664 | || ||||| || || | || | | | ||||| ||||||| ||||| ||||||| Sbjct 535 ATCAATTCGAAGGACAAGCCTGTTATTTAGGGTTTGATTTGGCGCGCAAGCTAGATATGA 594 Query 1665 ACAGCATGGCGCGACTTTATACCCGTGAGATTGACGGTAAAACG-CATTACTACAGTGTG 1723 | |||||||| || | | || |||||||||| |||| |||||| ||||| |||||| | Sbjct 595 ATAGCATGGCCCGCGTGTTTATCCGTGAGATTAACGG-AAAACGTCATTATTACAGTATT 653 Query 1724 GCCCCGCGTTTCTGGGTACCGTATGACACGGTGTACAGCGTCGAGAAAACTGAAGATCGC 1783 ||||| | |||||||| || || |||| |||||||| | || | | | ||||| Sbjct 654 GCCCCTAGGTTCTGGGTGCCTTACGACAGCGTGTACAGTGCAGATACCA---ACGATCGT 710 Query 1784 CGGACCGCCGAACGCTTTCAGAAATGGGTGGAAATGGGCGTCCTGACCGTTACCGATGGT 1843 || || || ||||| ||||| || ||||| | ||| | || | || ||||| || Sbjct 711 CGCACAGCGGAACGATTTCAAAAGTGGGTCAATATGCACCAGCTAATCGCGACCGACGGG 770 Query 1844 GCAGAGGTGGATTATCGCTACATCCTCGAAGAGGCCAAAGCGGCGAACAAAATCAGCCCG 1903 ||||| || || || || || ||||||||||| || || || || ||| | | |||| Sbjct 771 GCAGAAGTTGACTACCGGTATATCCTCGAAGAAGCAAAGGCCGCTAACTGTCTTAACCCG 830 Query 1904 GTCAGCGAGTCACCCATCGACCCCTTCGGGGCGACCGGGCTCTCACATGACCTTGCTGAT 1963 ||| | ||| | ||||| || || || || || || ||| | | || || Sbjct 831 GTCGTGCAATCAGCGATCGATCCTCATGGCGCCACTGGCCTGAGTCATCAGTTGGCCGAC 890 Query 1964 GAAGACCTGAATCCCGTCACTATCGTCCAGAACTTCACCAATATGTCCGATCCGATGAAA 2023 || | || || || ||||| || |||| || | ||| ||||||| ||| | |||||| Sbjct 891 GAGCAACTTAACCCTGTCACCATTATCCAAAATTACACGCATATGTCAGATGCCATGAAA 950 Query 2024 GAGCTGGAAGCAGCGATTGAATCGGGACGTTTTCATCATGACGGCAATCCCATCATGACC 2083 || ||||||| || |||||||| || || ||||| || || || | |||||||||||| Sbjct 951 GAATTGGAAGCCGCCATTGAATCTGGCCGCTTTCACCACGATGGTCACCCCATCATGACC 1010 Query 2084 TGGTGTATCGGCAACGTGGTCGGCAAAAACATGCCGGGTAACGATGATGTGGTGAAGCCT 2143 ||||| ||| |||||||||| || ||| | |||||||||||||||| | || || Sbjct 1011 TGGTGCATCAGCAACGTGGTGGGTAAACATGTGCCGGGTAACGATGACATTGTTCGCCCG 1070 Query 2144 GTCAAGGAGCAGGCGGAAAACAAAATTGACGGTGCAGTTGCGCTGATTATGGCGGTTGGC 2203 | || || |||| ||||||||||||||||| || || || | || ||||| ||||| Sbjct 1071 ATAAAAGAACAGGAAGAAAACAAAATTGACGGCGCCGTCGCATTAATCATGGCAGTTGGT 1130 Query 2204 AGAGCCATGCT 2214 | || ||||| Sbjct 1131 CGGGCAATGCT 1141 >seq54837 Length=669 Score = 196 bits (216), Expect = 1e-45 Identities = 399/590 (68%), Gaps = 6/590 (1%) Strand=Plus/Minus Query 8497 GAGATGAACGATACCAGCGGTCGCTGGAGCTATGCGCGTCAGCTGTATGGTCATGTGTAC 8556 |||||||||||||||| ||| || ||||||| || |||||||||||||| |||||||| Sbjct 601 GAGATGAACGATACCACCGGGCGATGGAGCTGGGCACGTCAGCTGTATGGGCATGTGTAT 542 Query 8557 ACGGCAAAGATCGGCACGCTGTCAGAACTGGTGACCG-CAG--GTGACCAGTTTAACCAG 8613 || |||||| | || | || || || ||| | | ||| || || | || | Sbjct 541 ACCGCAAAGTTGGGGAAACTCTCCGATCTGTTTGCTATCAGCGGTAGCC---TCAATGAC 485 Query 8614 CAGCACATTACCCTGGCGGGATACGAAAAAGAGACCCAGACGCCTGCCGACGAGCTGGCG 8673 | || | || | || || ||| | | || | | | || || || | || Sbjct 484 CCCCATGTCACGGTCTGTGGCTATGAACCTGCTATTCAAATGGCGGCTGATGAATTAACG 425 Query 8674 GCAAGCCGTACCGCCCGCGCAGCGGTGTTTATTCGCAACGATCCGGCACGTCCCACGCAG 8733 || || |||||| | || | ||||||||||||||||| || | || ||| Sbjct 424 GCGCTACGGACCGCCAGAAACGCCCTCTTTATTCGCAACGATCCCGCCAGACCGGTGCAA 365 Query 8734 ACCGGTGAGCTGGTGGGTATGCTGCCTGCGCCGAAGGGGAAACGGTTCACGATGACCGAA 8793 || || ||| || | || || | |||| |||| || || |||| ||| Sbjct 364 ACTGGCCTGCTCAATGGCGCTTTACCCGCCCGTCCGGGGCAACGTTTTACCTTGACTGAA 305 Query 8794 CAACAGACCCTGCTGTCTCATGGCGTGGCAACGGCGTATGTCGAAAGCGGGGTGCTGCGC 8853 || || | ||| | | |||||| | || ||||| || || ||| ||||| |||||| Sbjct 304 CAGCAATCACTGTTAACCCATGGCATCGCCACGGCCTACGTAGAAGGCGGGCAGCTGCGG 245 Query 8854 ATTCAGCGTGATGTCACCACGTACAGGAAAAACGCTTACGGTGTTGCGGATAACAGCTAC 8913 ||||| ||||| ||||||| ||| |||||| |||||||| ||| ||||||||||| Sbjct 244 ATTCAACGTGAAATCACCACCTACCAGAAAAATGCTTACGGCAATGCTGATAACAGCTAT 185 Query 8914 CTCGACAGCGAGACGCTGCATACCAGCGCGTATGTACTGCGCAAACTGAAATCCGTCATT 8973 || |||||||| || |||||||||| || ||||| ||| | |||||| || || Sbjct 184 CTGGACAGCGAAACCTTGCATACCAGTGCTTATGTGCTGAGACGCCTGAAAAGTGTGATC 125 Query 8974 ACCAGTAAGTACGGGCGTCACAAGCTTGCCAGCGACGGTACCCGCTTTGGTCCCGGTCAG 9033 || || || || || ||||| | |||| ||||| || |||||||| || || || Sbjct 124 ACGAGCAAATATTCACGACACAAATTAGCCAATGACGGGACGCGCTTTGGGCCAGGGCAA 65 Query 9034 GCGATTGTCACCCCGGCGGTGATCAAAGGGGAACTGCTGGCAACCTACCG 9083 || || |||||||| | || || || ||| || |||| |||||||| Sbjct 64 GCCATCGTCACCCCTGTCGTCATTCGTGGTGAATTGTTGGCCACCTACCG 15 >seq55013 Length=475 Score = 168 bits (186), Expect = 2e-37 Identities = 276/404 (68%), Gaps = 33/404 (8%) Strand=Plus/Minus Query 25338 GCAGTATTTTCGACAATGCGCTCGGCTTCATCCTTGTCATAGATACCAGCAAATCCGAAG 25397 |||||| ||| | || ||||| ||||| || |||||| || || ||||| || || Sbjct 418 GCAGTACCTTCTATGATTCGCTCAGCTTCGTCTGGGTCATAAATCCCCGCAAACCCAAAT 359 Query 25398 GCCAGACGGGCACACTGAATCATGGCTTTATGCCGTAACATCCGTTTGGGATGCGACTGC 25457 |||| |||||||| ||||||||||||||||| |||||||| || || ||||| ||| Sbjct 358 GCCAAGCGGGCACATTGAATCATGGCTTTATGGCGTAACATGCGCTTTGGATGACTGTGC 299 Query 25458 CACGGTCCGGTGATTTCTCTGCCTTCGCGGGTTTTGAATGGTTCGCGGCGGCATTCATCC 25517 || || || || || ||| || ||||| | Sbjct 298 CATGGGCCTGTA---------------------------GG---GCGTCGACATTCCGTC 269 Query 25518 ATCCACTCGGTAACGCAGATCGGATGATTACGGTCCTTGCGGTAAATCCGGCATGTGCAG 25577 || | || || || | | ||||||| ||||| || ||||| || ||||| |||||| Sbjct 268 ATGAATTCAGTGACTTCGGTAGGATGATGGCGGTCTTTTCGGTAGATACGGCAGGTGCAG 209 Query 25578 GATTCATTGTCCTGCTCAAAGTCCATGCCATCAAACTGCTGGTTTTCATTGATGATACGG 25637 | | || ||| |||| ||| |||||||||||| || | |||||| || ||||| || Sbjct 208 GCCTGATCGTCTTGCTGAAACGTCATGCCATCAAAGTGTTCGTTTTCGTTAATGATGCGT 149 Query 25638 GACCAGCCATCAACGCCCACCACCGGAACGATGCCGTTCTGCTTGTCAGGGAAGGCGTAA 25697 ||||| ||||||| ||| || ||||| ||||| ||| || || || || |||||| Sbjct 148 GACCAACCATCAATGCCAACGACCGGCACGAT---GTTACCTTTATCGGGAAAAGCGTAA 92 Query 25698 ATTTCTTTCGTCCACGGATTAAGGCCGTACTGGTTGGCGACGAT 25741 ||||| || || | ||||| ||||| || || |||| || || Sbjct 91 ATTTCCTTGGTAAAGGGATTGAGGCCATATTGACTGGCAACAAT 48 >seq36486 Length=229 Score = 145 bits (160), Expect = 2e-30 Identities = 139/178 (78%), Gaps = 0/178 (0%) Strand=Plus/Minus Query 10326 TACCCGGTACAACGGCTGATTTCCAGAACATGATGCAGATGCTGGTGCGTCAGGGGATCC 10385 ||||||| || || |||||||| || | |||||||| ||||| ||||| || ||||||| Sbjct 178 TACCCGGGACGACTGCTGATTTTCAACATATGATGCAAATGCTTGTGCGCCAAGGGATCC 119 Query 10386 CGGCAGAAAACATTCTGAGTGGTGTGGGTAAAGCGACAGCTTATCTTGCGGTACAACTGa 10445 | |||||||| || || | ||||||| ||||| |||| ||||||||||| || || | Sbjct 118 CAGCAGAAAATATCCTTAACGGTGTGGCCAAAGCTTCAGCCTATCTTGCGGTGCAGCTCA 59 Query 10446 aaaaaaCACCGGAAGCGGCTGCTGAGTTTGCTGCAAAGATGCAGGATGCTACCGGAAC 10503 ||||| | || || || || || || ||||| ||||| ||||| ||||| || || || Sbjct 58 AAAAACCCCCTGAGGCCGCCGCAGAATTTGCAGCAAAAATGCAAGATGCGACAGGCAC 1 >seq55042 Length=1078 Score = 141 bits (156), Expect = 2e-29 Identities = 231/330 (70%), Gaps = 2/330 (1%) Strand=Plus/Minus Query 9282 GGAACCTGTTATTTCAAAATTGACGGTCAGCAGCTATCGCTGACCGGCGGCATTGAGGTG 9341 || |||||||| |||||| | || || | ||| |||| ||||| || || ||||| || Sbjct 868 GGCACCTGTTACTTCAAAGTAGATGGGTATCAGTTATCTCTGACAGGGGGAATTGAAGTC 809 Query 9342 CCCATGAACAGGACGGTCAATGATGACATCATCGGCCTGGACGGTTCAGTGGACCGCAAG 9401 || ||||||| ||||| || || ||||||||||||| || || || ||| Sbjct 808 CCGATGAACACAGTGGTCAGAGAAGATATCATCGGCCTGGCAGGGGATGTAGATTACAAA 749 Query 9402 GAAACTCACCGTGCGCCTTATGTCAAAGGGACCTTCAAGGTGCCGAAGAATTTTCCGGTG 9461 |||||| || | |||||| | | ||||| || || |||||||| | || || Sbjct 748 GAAACTTACAGGGCGCCTCACATAAAAGGAACGTTTAAGGTGCCAGCGCGCTTCCCTAAA 689 Query 9462 AGCAAAATCACCTCGTCTGATGAG-ATGACCATCACTGCCGAGCTGGCGAACGGTCAGGT 9520 ||||||| | || | || ||||||||||| || || ||||| ||| | ||| Sbjct 688 GATAAAATCATCAGCTC-AACCAGCATGACCATCACAGCAGAACTGGCAAACAGCATGGT 630 Query 9521 CTATGTATTGTCGTCCGCCTGGCTGCACGGAGAAGCGAACCATAATGCCGAAGAAGGCAC 9580 || || || || || |||||||| || |||||||| ||||||||||||||| | Sbjct 629 TTACGTCTTATCAGGGGCTTGGCTGCATGGTGAAGCGAATGTTAATGCCGAAGAAGGAAA 570 Query 9581 GGTTGATCTTGAGTTCCACGGTGAAGAAGG 9610 || || || || || || ||||||||||| Sbjct 569 AGTGGAGCTGGAATTTCATGGTGAAGAAGG 540 >seq56058 Length=267 Score = 118 bits (130), Expect = 3e-22 Identities = 167/230 (73%), Gaps = 6/230 (3%) Strand=Plus/Minus Query 10514 GACATGATGGGGCTGTTCGACACTATCCAGAAGGCGTTTTATCTGGGCGTGGACGATACC 10573 |||||||||||| |||| || || |||||||| || |||||| | ||||| || |||| | Sbjct 256 GACATGATGGGGTTGTTTGATACCATCCAGAAAGCCTTTTATTTAGGCGTAGAGGATAGC 197 Query 10574 AACATGTTGTCCTTCTTCACTAAAACCAGCTCTGTTCTGAAGATGGTGAACAAGGACGGT 10633 | || | ||||||| | |||||||| | | ||| ||||| ||||| || || Sbjct 196 CAGTTGCTTGCCTTCTTTAGCAAAACCAGTGCCATCATGACCATGGTCAACAAAGAGGGA 137 Query 10634 CTTCAGGCTGCACAGAGCCTT-GCCCCCATCAGCGTCATGATGGATCAGATGGGGATGAA 10692 | || || || | |||| | || || ||| |||||||||||| |||||||| ||| Sbjct 136 TTACAAGCCGCCC-GAGCAATAGCACCGATCGCCGTCATGATGGACCAGATGGGAATG-- 80 Query 10693 CGGGGAG--TCGGCAGGTAACGCCCTGCGAAAAGTTATCCAGTCCGGATT 10740 ||||||| || ||||| || || |||| || || | ||| |||| || Sbjct 79 CGGGGAGAATCAGCAGGAAATGCGTTGCGTAAGGTCTTTCAGGCCGGCTT 30 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 122641086290390