Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Achipteria_20coleoptrata_20[genbank_20GCA_5F000988765.1_202015-05- 06] 56,345 sequences; 88,443,889 total letters Query= NC_028092.1 Length=193301 Score E Sequences producing significant alignments: (Bits) Value seq11840 138 1e-27 >seq11840 Length=1854 Score = 138 bits (152), Expect = 1e-27 Identities = 430/652 (66%), Gaps = 24/652 (4%) Strand=Plus/Plus Query 118181 ATAGATATTGGTCGTGTATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCTGTGGA 118240 ||| ||||| | ||||| ||||| | |||||||||| || || || || || || || Sbjct 758 ATATATATTACTAGTGTAGGGCTCTATCGACTCATTGTTGCCTAATATCTGTGCCGTAGA 817 Query 118241 GGCTGTGGGCATGGGTGCCATGAGAAGGCTGTTACGGAGACCCTTTTCCCTAATGCGTTC 118300 || || ||||| || |||| ||| || ||||| | || | || || ||| Sbjct 818 AGCGGTCGGCATCGGAGCCAACGTAAGACTATTACGTACTCCATATTTGGCGATCTTTTC 877 Query 118301 CTTGAGAGCGTCCCAGT--CGTAGTTGAGCTTTGTCTCCCCCTGCCACATATCAAACTGG 118358 ||| || || |||| | | |||| || ||| | | | ||||||||| | || Sbjct 878 CTTAAGTTCGGCCCAATTCCAGAGTTCAG--TTGGCGTTCGGTCCCACATATCGTATTGA 935 Query 118359 AGGATACCTTGGGACGCTGGCGATCCCTCAAATGTCTCATATGGGCCCTCAACCTCCGCC 118418 || ||||||| || | ||||| || ||| |||||||||| || ||| | | ||| Sbjct 936 AGAATACCTTTAGAGACCGGCGAACCTTCATATGTCTCATAAGGTCCCAACTCTTTAGCC 995 Query 118419 AATTCGGAGCTCGCCTCGAGGGCTGCGTGATACATTGTTTCAAAAATGCGAGCATTCATT 118478 ||||| | || ||||| | || ||| ||| || || |||||||| | ||| | | Sbjct 996 AATTCACAACTGGCCTCCAAAGCGCCGTAATATATGGTCTCAAAAATCTGGATATTAAGT 1055 Query 118479 GCCTTGGCCTCGTCGGAAT--CAAACGCGAGTCGGCACAA-AATAAATACA-TCCGCGAG 118534 || || || ||| | |||| | | || || || |||||| ||| || || | Sbjct 1056 CGTTTCGCTTCT--GGACTTTCAAAGGGCTGACG-CATAAGAATAAA-ACAGTCGGCCAA 1111 Query 118535 ACCTTGGACACCGAGGCCAATTGGGCGATGTCTCATATTAGACTTCCGAGCGGTCTCC-- 118592 ||| || || || | || || || || |||||| ||||||| || | || ||| Sbjct 1112 ACCCTGAACTCCAATACCGATGGGTCGGTGTCTCTTATTAGAG---CGCTCTGTTTCCGG 1168 Query 118593 -ACGGGATAAAAATTCCTATCGATAACCCTATTTAGATTTTTGGTGACAACCTTTGTGAT 118651 || ||||| | || || || | |||| |||||| | |||| ||| || | | Sbjct 1169 CACAGGATAGTAGTTAAGGTCAATGATTTTATTGAGATTTCTTGTGATAACTTTAGCCAC 1228 Query 118652 TTCATGAAGCTTTTCGTAATCAAA--ACTGCGAGTCTCTTCA-TTGACATACTTAGGAAG 118708 ||| | || || | |||| || || || || ||| ||||| | | | Sbjct 1229 TTCTTTGAGTTTCGCAAAATCGAAGGACAGC---TCCCTTTTGTTGACGAATCGATTCAA 1285 Query 118709 GGCGATTGACGCCAGATTACACACAGAGGTCTCATCCTTATCAGTGTACTCTATAATTTC 118768 || |||||||||| ||| || || | | ||||||| || | |||||| || ||||| Sbjct 1286 AGCAATTGACGCCAAATTGCAGACTGCGATCTCATCTTTGGACGAGTACTCAATTATTTC 1345 Query 118769 CGTGCACAAGTTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTT 118820 ||||| ||||| || | ||||||||| ||||| || | ||||||||||||| Sbjct 1346 TGTGCATAAGTTCGAGCACTTAATGGTTCCCAAATTTTGTTGATTTGACTTT 1397 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 617999628358200