Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Achipteria_20coleoptrata_20[genbank_20GCA_5F000988765.1_202015-05- 06] 56,345 sequences; 88,443,889 total letters Query= NC_028093.1 Length=182309 Score E Sequences producing significant alignments: (Bits) Value seq11840 122 1e-22 >seq11840 Length=1854 Score = 122 bits (134), Expect = 1e-22 Identities = 292/430 (68%), Gaps = 14/430 (3%) Strand=Plus/Minus Query 105203 TCTAATATGAGACACCGTCCAATTGGTCTCGGTGTTCAGGGTCTCGCGGA-TGTATTCAT 105261 ||||||| ||||||||| || || ||| | || ||||||||| | || || ||| || || Sbjct 1153 TCTAATAAGAGACACCGACCCATCGGTATTGGAGTTCAGGGTTTGGCCGACTGTTTT-AT 1095 Query 105262 TCTTTGTCGCCACGCATTTGAT--TCCGACGAAGCGAAGGAAATCAATGCGCGCATATTT 105319 |||| || || | ||||| ||| |||||||| | | ||| | || ||| Sbjct 1094 TCTTATGCGTCAGCCCTTTGAAAGTCCA--GAAGCGAAACGACTTAATATCCAGATTTTT 1037 Query 105320 GAGACCATGTATCACGCCGCTCTTGAGGCGAGTTCAGAGTTGGC-AGAG-GTTGATGGTC 105377 |||||||| ||| ||| |||| | ||||| |||| || ||||| | || |||| || | Sbjct 1036 GAGACCATATATTACGGCGCTTTGGAGGCCAGTTGTGAATTGGCTAAAGAGTTG--GGAC 979 Query 105378 CATATGAAACCTTTGAGGGTTCTCCAGCTTCACAAGGGGTGCTTCAATTTGATATGTGGG 105437 | ||||| || | ||| ||||| || | || |||| | ||||||| |||||||||| Sbjct 978 CTTATGAGACATATGAAGGTTCGCCGGTCTCTAAAGGTATTCTTCAATACGATATGTGGG 919 Query 105438 AAGGTGAGACCAAGCTTCACTACG--ACTGGGAAGCTCTCAAGGAACGCATCAAGGAGAA 105495 | | | |||| || ||| | | |||| | || |||||| ||| | | Sbjct 918 ACCG-AACGCCAA-CTGAACTCTGGAATTGGGCCGAACTTAAGGAAAAGATCGCCAAATA 861 Query 105496 GGGTCTTCGTAACAGTCTCCTCATGGCTCCAATGCCAACAGCCTCCACCGCACAAATCTT 105555 || | ||||| ||||| ||||||| ||||| || || || || ||||| || || Sbjct 860 TGGAGTACGTAATAGTCTTACGTTGGCTCCGATGCCGACCGCTTCTACGGCACAGATATT 801 Query 105556 GGGTAATAATGAATGCTTTGAACCCTACACGACGAACATCTATCTGAGAAGAACCCTCGC 105615 || || ||||| | | || |||||||| | || || ||| | || |||| | Sbjct 800 AGGCAACAATGAGTCGATAGAGCCCTACACTAGTAATATATATTCCCGTCGAGTCCTCTC 741 Query 105616 GGGAGAGTTT 105625 ||||||||| Sbjct 740 CGGAGAGTTT 731 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 582850002127800