Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Achipteria_20coleoptrata_20[genbank_20GCA_5F000988765.1_202015-05- 06] 56,345 sequences; 88,443,889 total letters Query= NC_028238.1 Length=188534 Score E Sequences producing significant alignments: (Bits) Value seq54144 111 2e-19 seq14363 89.7 6e-13 >seq54144 Length=1810 Score = 111 bits (122), Expect = 2e-19 Identities = 154/214 (72%), Gaps = 4/214 (2%) Strand=Plus/Minus Query 22656 GCTATTTTTTCAAATATAAGTTGTGCTACTCTATCGCCCTTATTTACGTAAAATA--CAT 22713 || ||| ||||||| | | ||||||||| | ||| || ||| | | |||| || | | Sbjct 1667 GCAATTCTTTCAAAAACCAATTGTGCTACCCGATCTCCTTTACTGA--TAAAGTAATCTT 1610 Query 22714 CCTTACTAAAATTAAATAACAATATACCTATATTTCCCCTGTAATCTCTATCTATCACAC 22773 || ||||||||| || | || || ||||| || || ||||| | ||||| |||| Sbjct 1609 GGTTTGAAAAATTAAACAAAATTACACAAATATTGCCTCTATAATCACAATCTACAACAC 1550 Query 22774 CCGCGCCTACATCGATAAAATGATTACATGCCAATCCCGATCTAGGAGATATTCTTCCAT 22833 | | || ||||| ||| || ||| || || ||||||||||| |||| |||||||||| Sbjct 1549 CGCCTCCAACATCAATACCATAATTCCAAGCTAATCCCGATCTTGGAGCAATTCTTCCAT 1490 Query 22834 ATAATCCTTCCGGTATATCTATTATAATATCAGT 22867 ||| || ||||| |||| | | |||||||| Sbjct 1489 ATATATTTTGTGGTATTTCTAGTTTTATATCAGT 1456 >seq14363 Length=9417 Score = 89.7 bits (98), Expect = 6e-13 Identities = 156/225 (69%), Gaps = 4/225 (2%) Strand=Plus/Plus Query 22663 TTTCAAATATAAGTTGTGCTACTCTATCGCCCTTATTTACGTAAAATA--CATCCTTACT 22720 ||||| | ||||| || |||| ||||||||| || || | ||||| ||| | | Sbjct 369 TTTCACAAATAAGCTGAGCTATTCTATCGCCACGATGTA--TTAAATAATCATGATCAGA 426 Query 22721 AAAATTAAATAACAATATACCTATATTTCCCCTGTAATCTCTATCTATCACACCCGCGCC 22780 ||||| |||| | || | ||| || ||| | |||| ||||| || ||||| || Sbjct 427 GAAATTGAATAGGACTACCGAAACATTCCCTCTGAAGTCTCGGTCTATAACTCCCGCACC 486 Query 22781 TACATCGATAAAATGATTACATGCCAATCCCGATCTAGGAGATATTCTTCCATATAATCC 22840 | ||| ||||||||||| || || | ||| |||| || | ||||| ||||| |||| Sbjct 487 AATATCAATAAAATGATTCCAAGCTAGTCCTGATCGTGGTGCTATTCGGCCATAACATCC 546 Query 22841 TTCCGGTATATCTATTATAATATCAGTCATTACTAATTGTTTACC 22885 || || ||| | | | | ||||| || | || | ||||||||| Sbjct 547 TTGTGGAATAACAAATTTGATATCGGTTACCACAAGTTGTTTACC 591 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 602755972222800