Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Achipteria_20coleoptrata_20[genbank_20GCA_5F000988765.1_202015-05- 06] 56,345 sequences; 88,443,889 total letters Query= NC_028636.1 Length=135952 Score E Sequences producing significant alignments: (Bits) Value seq17432 181 9e-41 seq38498 163 2e-35 seq669 163 2e-35 seq214 143 2e-29 >seq17432 Length=31749 Score = 181 bits (200), Expect = 9e-41 Identities = 178/230 (77%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 ||||| || ||||| || ||||||||||| || | || || ||||| ||||| || ||| Sbjct 24366 ATGCAAATCTTTGTTAAGACTCTGACCGGAAAAACCATAACCCTTGAGGTGGAGCCCTCC 24425 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| | ||||||| || || ||||| ||||| ||||||||||| || ||||| ||| Sbjct 24426 GACACCATTGAGAACGTTAAGGCCAAAATCCAAGATAAAGAAGGCATCCCTCCCGACCAA 24485 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 || | | || | |||||||||||| ||||||||| | || |||||||||| ||| Sbjct 24486 CAAAGACTGATCTTCGCCGGCAAACAGTTGGAAGACGGGCGCACTCTTTCCGATTATAAC 24545 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 |||||||||||||||||| | |||||||| | |||||| | || || || Sbjct 24546 ATTCAAAAGGAGTCGACCCTTCATTTGGTACTCCGTTTGAGAGGAGGAAT 24595 Score = 163 bits (180), Expect = 2e-35 Identities = 174/230 (76%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 ||||||||||| || || ||||||||||| ||| | |||||| | |||||||| ||||| Sbjct 24138 ATGCAGATATTCGTCAAGACTCTGACCGGAAAGACAATTACTTTGGAAGTGGAGCCGTCG 24197 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| | ||||||| || || ||||| |||||||||||||| || || || |||||| Sbjct 24198 GACACCATTGAGAACGTAAAGGCCAAAATCCAAGACAAAGAAGGTATTCCTCCGGATCAA 24257 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 ||| | | || | || ||||||||| | |||||| | || | || ||||| || Sbjct 24258 CAGAGACTGATCTTTGCGGGCAAACAACTAGAAGACGGCCGAACACTCTCTGATTATAAT 24317 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 ||||||||||||||||| | |||||||| | ||| || | || || || Sbjct 24318 ATTCAAAAGGAGTCGACTCTTCATTTGGTACTCCGTCTGAGAGGAGGAAT 24367 Score = 161 bits (178), Expect = 9e-35 Identities = 161/209 (77%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 ||||| ||||| || || || ||||||| ||| | || ||| | |||||||| ||||| Sbjct 24822 ATGCAAATATTCGTGAAGACATTGACCGGAAAGACCATCACTTTGGAAGTGGAGCCGTCG 24881 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| | || |||| || || || ||||||||||||||||| || || || ||||| Sbjct 24882 GACACCATCGAGAATGTAAAGGCTAAGATTCAAGACAAAGAAGGGATTCCTCCGGATCAG 24941 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 || || || || | ||| ||||||||| |||||||| | || ||||||| ||||| Sbjct 24942 CAACGATTGATCTTCGCTGGCAAACAACTGGAAGACGGGCGCACTCTTTCCGACTACAAT 25001 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGT 27196 |||||||||||||||||| | |||||||| Sbjct 25002 ATTCAAAAGGAGTCGACCCTTCATTTGGT 25030 Score = 158 bits (174), Expect = 1e-33 Identities = 173/230 (75%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 ||||| ||||| || ||||| ||||||| ||| | || ||| | |||||||| ||||| Sbjct 24594 ATGCAAATATTCGTCAAAACATTGACCGGAAAGACCATCACTTTGGAAGTGGAGCCGTCG 24653 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| | ||||||| || || |||||||| |||||||| || || || || |||||| Sbjct 24654 GACACCATTGAGAACGTGAAGGCGAAAATTCAGGACAAAGAGGGTATTCCTCCGGATCAA 24713 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 |||||| | || | ||||||||||||| | |||||| | || | || || || || Sbjct 24714 CAGCGTCTTATCTTCGCCGGCAAACAACTAGAAGACGGCCGAACACTCTCTGACTATAAT 24773 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 ||||||||||||||||| | |||||||| | ||| || | || || || Sbjct 24774 ATTCAAAAGGAGTCGACTCTTCATTTGGTACTCCGTCTGAGAGGAGGAAT 24823 Score = 154 bits (170), Expect = 1e-32 Identities = 172/230 (75%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 ||||| || || || ||||| ||||||| || | ||||| ||||| ||||| || ||| Sbjct 23746 ATGCAAATTTTCGTGAAAACGTTGACCGGAAAAACCATTACCCTTGAGGTGGAGCCCTCC 23805 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| | ||||||| || || || ||||| |||||||| ||||| || ||||| ||| Sbjct 23806 GACACCATTGAGAACGTGAAGGCCAAGATTCAGGACAAAGAGGGCATCCCTCCCGACCAA 23865 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 ||| | | || | || ||||||||| | |||||| | || | |||||||||||| Sbjct 23866 CAGAGACTGATCTTTGCGGGCAAACAACTAGAAGACGGCCGCACTCTCTCCGATTACAAC 23925 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 |||||||||||||| ||| | |||||||| | ||| || | || || || Sbjct 23926 ATTCAAAAGGAGTCAACCCTTCATTTGGTACTCCGTCTGAGAGGAGGAAT 23975 >seq38498 Length=6817 Score = 163 bits (180), Expect = 2e-35 Identities = 233/328 (71%), Gaps = 0/328 (0%) Strand=Plus/Minus Query 135460 GACGCATGACCCGTTGTGGAACGCGGCACAACGGCAGCTTAAGCGAGAAGGCAAAATGCA 135519 ||| || |||| |||||||||| | || || | || | | |||| ||||||||||| Sbjct 5573 GACTCACGACCAGTTGTGGAACTCCGCTCAGAGACAAATGACAAGAGATGGCAAAATGCA 5514 Query 135520 CGGATTTATGCGCATGTATTGGGCAAAAAAGATATTGGAATGGTCTGCATCGCCTGCAGA 135579 || |||||||| |||||||||||||| |||||| | || ||| | | | || | | | Sbjct 5513 TGGCTTTATGCGAATGTATTGGGCAAAGAAGATACTCGAGTGGACACAAACACCAGAACA 5454 Query 135580 GGCGCTACAACACGCAATATTTTTTAATGATTACTACAGTTTAGATGGACGCGATTCAAA 135639 |||||| || ||| || |||| || ||| | ||| || || |||||||| | || Sbjct 5453 GGCGCTCGAATTCGCTATTCTTTTGAACGATAAGTACGAATTGGACGGACGCGACCCCAA 5394 Query 135640 TGGCTACGTAGGTTGTATGTGGTCTATTTGCGGTGTACACGATCAAGGATGGAAGGAGCG 135699 || || || || |||||||||||||| || ||| | |||||||| |||||| || | Sbjct 5393 CGGGTATGTCGGCTGTATGTGGTCTATATGTGGTATTCACGATCAGGGATGGGCTGAAAG 5334 Query 135700 CAAAGTGTTTGGCAAGATTCGCTATATGAACTATGACGGTTGTACAAGAAAATTTAATGT 135759 ||||| ||||| ||||| || |||||||| | || ||| | || ||| |||| Sbjct 5333 GCCGGTGTTCGGCAAAATTCGTTACATGAACTACAAGGGATGTGAGCGCAAGTTTGATGT 5274 Query 135760 AAATTTGTACGTGAGAAAATATAATAAA 135787 ||| ||| | | |||||| | ||| Sbjct 5273 CAATCAATACATTAATAAATATCACAAA 5246 >seq669 Length=42814 Score = 163 bits (180), Expect = 2e-35 Identities = 174/230 (76%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 ||||| |||||||| ||||| || ||||| ||| |||| |||||||| || || || || Sbjct 32523 ATGCAAATATTTGTGAAAACCCTCACCGGAAAGACTATCACTCTTGAGGTCGAGCCCTCT 32464 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| | || || | || || ||| ||||| |||||||||||||| || || ||||| Sbjct 32463 GACACTATCGAAAATGTAAAGGCAAAGATTCAGGACAAAGAAGGCATTCCTCCGGATCAG 32404 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 ||| | || |||| || |||||||| || |||||| | || | || ||||||||| Sbjct 32403 CAGAGATTGATATTTGCGGGCAAACAGTTAGAAGACGGACGCACTCTCTCTGATTACAAC 32344 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 ||||| |||||||| ||| | ||||| ||| | |||||| | || || || Sbjct 32343 ATTCAGAAGGAGTCAACCCTTCATTTAGTTCTTCGTTTGAGAGGAGGAAT 32294 Score = 134 bits (148), Expect = 1e-26 Identities = 166/227 (73%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 ||||||||||| || || || || ||||| ||| | |||||| | |||||||| | || Sbjct 31841 ATGCAGATATTCGTGAAGACCCTCACCGGAAAGACCATTACTTTGGAAGTGGAGGCTTCG 31782 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 || | || || | || || ||| ||||| ||||| ||||| || || || |||||| Sbjct 31781 GATACCATCGAAAACGTGAAGGCAAAGATTCAGGACAAGGAAGGTATTCCTCCGGATCAA 31722 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 ||| | | || | || |||||||| || || ||| | || | || ||||||||| Sbjct 31721 CAGAGACTTATCTTTGCGGGCAAACAGTTAGAGGACGGCCGCACTCTCTCTGATTACAAC 31662 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGG 27214 ||||| ||||||||||| | ||||||||| | |||||| | || || Sbjct 31661 ATTCAGAAGGAGTCGACTCTCCATTTGGTTCTTCGTTTGAGAGGAGG 31615 Score = 131 bits (144), Expect = 1e-25 Identities = 167/230 (73%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 ||||| ||||| || ||||| || ||||| ||| | |||||| | |||||||| | ||| Sbjct 32069 ATGCAAATATTCGTGAAAACCCTCACCGGAAAGACAATTACTTTGGAAGTGGAGGCCTCC 32010 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 || | || || | || || ||| ||||| ||||| |||||||| || || |||||| Sbjct 32009 GATACCATCGAAAACGTTAAGGCAAAGATTCAGGACAAGGAAGGCATTCCTCCGGATCAA 31950 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 ||| | | || | || |||||||| || || ||| | || | || ||||||||| Sbjct 31949 CAGAGACTTATCTTTGCGGGCAAACAGTTAGAGGACGGCCGCACTCTCTCTGATTACAAC 31890 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 || ||||| ||||| ||| | ||||| || | |||||| | || || || Sbjct 31889 ATCCAAAAAGAGTCAACCCTTCATTTAGTCCTTCGTTTGAGAGGAGGAAT 31840 Score = 100 bits (110), Expect = 2e-16 Identities = 96/123 (78%), Gaps = 0/123 (0%) Strand=Plus/Minus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 ||||||||||| || ||||| || ||||| ||| | |||||| | |||||||| | ||| Sbjct 32295 ATGCAGATATTCGTGAAAACCCTCACCGGAAAGACAATTACTTTGGAAGTGGAGGCCTCC 32236 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| | || || | || || ||| ||||| ||||| |||||||| || ||||||||| Sbjct 32235 GACACCATCGAAAACGTTAAGGCAAAGATTCAGGACAAGGAAGGCATTCCTCCCGATCAA 32176 Query 27108 CAG 27110 ||| Sbjct 32175 CAG 32173 >seq214 Length=17119 Score = 143 bits (158), Expect = 2e-29 Identities = 157/209 (75%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 ||||| || || || || || |||| || ||| | || |||||||| ||||| || | Sbjct 1182 ATGCAAATCTTCGTCAAGACGTTGACGGGTAAGACCATCACTCTTGAGGTGGAGCCCAGC 1123 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 || | ||||||| || || ||| ||||| ||||| || |||||||| || ||||| Sbjct 1122 GATACTATTGAGAATGTAAAGGCAAAGATTCAGGACAAGGAGGGCATACCTCCGGATCAG 1063 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 ||||| || || | || ||||||||||| |||||| | || || |||||||||| Sbjct 1062 CAGCGGTTGATCTTTGCTGGCAAACAATTAGAAGACGGCAGAACTCTTAGCGATTACAAC 1003 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGT 27196 || ||||||||||||||| | |||||||| Sbjct 1002 ATCCAAAAGGAGTCGACCCTTCATTTGGT 974 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 434612081534400