Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Achipteria_20coleoptrata_20[genbank_20GCA_5F000988765.1_202015-05- 06] 56,345 sequences; 88,443,889 total letters Query= NC_028657.1 Length=60919 Score E Sequences producing significant alignments: (Bits) Value seq55013 111 6e-20 >seq55013 Length=475 Score = 111 bits (122), Expect = 6e-20 Identities = 241/354 (68%), Gaps = 15/354 (4%) Strand=Plus/Plus Query 6082 CTGAACCCCTTCACCAAGGAGTTGTACGCATTCCCCGACAAGAACAACGGCATCGTGCCG 6141 || || ||||| |||||||| | ||||| || ||||| || ||| ||||||||| Sbjct 69 CTCAATCCCTTTACCAAGGAAATTTACGCTTTTCCCGATAAAGGTAAC---ATCGTGCCG 125 Query 6142 GTTGTTGGTGTGGATGGCTGGGCTCGGATCATCAACGAGAACCCACAGTTCGATGGCATG 6201 || ||||| | ||||| ||| | || ||||| ||||| ||| ||| || |||||||| Sbjct 126 GTCGTTGGCATTGATGGTTGGTCACGCATCATTAACGAAAACGAACACTTTGATGGCAT- 184 Query 6202 GAATTCTCA-ATGGACCAGCAGGGAACCGAATGCACCTGCAAGATCTATCGGAAGGACCG 6260 || | ||| ||| | |||| || ||||||||| ||||| || || ||||| Sbjct 185 GACGTTTCAGCAAGACGATCAGG---CC---TGCACCTGCCGTATCTACCGAAAAGACCG 238 Query 6261 CAGCCATGCCATCAGCGCGACTGAGTACATGGCCGA--GTGCAAGCGGAACACCCAGCCT 6318 | ||| | | | | ||||| | |||| | || || | || ||| | || Sbjct 239 CCATCATCCTACCGAAGTCACTGAATTCATGACGGAATGTCGACGCCCTACAGGC--CCA 296 Query 6319 TGGCAGTCCCATCCGCGCCGGATGCTTCGCCACAAGGCAATGATTCAGTGCGCACGCCTC 6378 ||||| ||||| || ||| | ||||| || || |||||||| || || ||| | Sbjct 297 TGGCACAGTCATCCAAAGCGCATGTTACGCCATAAAGCCATGATTCAATGTGCCCGCTTG 356 Query 6379 GCGTTCGGGTTCGCCGGCATATACGACCAGGACGAGGCCGAGCGGATCGTTGAA 6432 || || ||||| || || || || |||| ||||| || ||||| ||| | ||| Sbjct 357 GCATTTGGGTTTGCGGGGATTTATGACCCAGACGAAGCTGAGCGAATCATAGAA 410 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 194688847082090