Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Achipteria_20coleoptrata_20[genbank_20GCA_5F000988765.1_202015-05- 06] 56,345 sequences; 88,443,889 total letters Query= NC_028683.1 Length=177643 Score E Sequences producing significant alignments: (Bits) Value seq54669 141 1e-28 >seq54669 Length=12211 Score = 141 bits (156), Expect = 1e-28 Identities = 267/386 (69%), Gaps = 10/386 (3%) Strand=Plus/Plus Query 147783 ATTAATCTGGACGCCATAATCTAAGTGACGAATACGGTTCTCGTCTACACCTTTATTGTT 147842 |||||| || || || ||||| | || |||| ||| || || || ||||| || || Sbjct 11831 ATTAATTTGTACCCCGTAATCCATATGGCGAACACGATTATCTTCAACACCACGGTTATT 11890 Query 147843 TTTCAGAACGAGAAGGTTTTCGACTTCTAAATGCCAAATTGGATAGTACAATGTTGCTGC 147902 ||| | || | || ||||| | ||||||||||| | ||| | | || |||||||| Sbjct 11891 TTTTAATACCAACAGATTTTCTATCTCTAAATGCCACAGGGGAAAAAATAACGTTGCTGC 11950 Query 147903 ACCACCACGTACACCACCTTGGGAACATGATTTAACAGAAGCTTGAATAGT-TTTCCAGA 147961 ||||||||| ||||| ||||| ||||| ||||| || | || |||| ||| ||| | | Sbjct 11951 ACCACCACGCACACCTCCTTGAGAACAAGATTTTACCGCAGTCTGAA-AGTGTTTATAAA 12009 Query 147962 ATGGAATCACGCCTGTGTGCTTAACTTCACCATGTCCAATCTTAGAACCTTCTGCACGAA 148021 | ||||| || || || | |||||||||| | ||| | ||||| ||||| | Sbjct 12010 ACGGAATACAACCGGTATGAAAAGCTTCACCATGACGAATTCCACTACCTTGCGCACGGA 12069 Query 148022 TCATACCAGCGTTAACACCAATACCAGCTCGTTTACTGATGTACTTAATGATTGAAGCAT 148081 | |||||| |||| |||||| || || || | | || || ||||||| || | Sbjct 12070 TGCGACCAGCATTAATACCAATCCCCGCGCGCTGCGAAACATATTTTATGATTG-CGCTT 12128 Query 148082 -TTGTGGTATTAATCGAATCCAGTGAATCACCACCTTCAATAACAACACAACTCGAG--- 148137 ||||| ||| || ||||||| || |||| ||| || | |||||| ||| Sbjct 12129 GCTGTGGCATTGATAGAATCCAAACTGTCCCCACATTCTATCAATACACAA---GAGCTA 12185 Query 148138 AATTGACGAGTCGGAGTACGAACACC 148163 ||||| || || || ||||| ||||| Sbjct 12186 AATTGGCGGGTAGGCGTACGTACACC 12211 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 567929318358600