Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Achipteria_20coleoptrata_20[genbank_20GCA_5F000988765.1_202015-05- 06] 56,345 sequences; 88,443,889 total letters Query= NC_028696.2 Length=41338 Score E Sequences producing significant alignments: (Bits) Value seq55999 109 1e-19 >seq55999 Length=1557 Score = 109 bits (120), Expect = 1e-19 Identities = 186/267 (70%), Gaps = 11/267 (4%) Strand=Plus/Minus Query 33748 TACGGCATCCAGTTATTCATCATCGACAGCCTCATGAAGTGCGGTATTGGCGATGACGAT 33807 |||| | || || | || ||||||||| ||||||| ||| || | | || || ||| Sbjct 1481 TACGACGTCAAGCTGTTTATCATCGACTCGCTCATGATGTGTGGCTTAAGTGAAGAGGAT 1422 Query 33808 TACAACGGGCAAAAGGCGTTTGTTGACGCGCTGTGCGACTTCAAGAATAAAACCAAC-TC 33866 |||| ||| ||||| | || | || || |||||||| ||||| || || | || Sbjct 1421 TACACCGGTCAAAAAGAATTCATAGAAGCCCTGTGCGAGTTCAA-----AACCCGTCATC 1367 Query 33867 T----CACATTATCCTCGTCACTCACTCCAGAAAGGGAGACAGCGAGGAGAAACCTACCG 33922 || ||| | || || || ||| |||||||| || | ||| || |||||| | Sbjct 1366 CGGTGCATATTTTGCTGGTAACACACCCCAGAAAGCTTGAGAACGAAGAAAAACCTGTGG 1307 Query 33923 GAAAGATGGACGTAAAAGGCTCAGGAGCGATTACAGACCTTACAGATAACCTGTTTATCA 33982 | || |||||||| |||||| | || || || || || | || |||||||| | | || Sbjct 1306 GTAAAATGGACGTGAAAGGCACCGGCGCCATCACCGATTTAACCGATAACCTACTGACCA 1247 Query 33983 TCTGGCGCAATAAAGCTCGCGAGAGAG 34009 |||||||||||||| ||||| |||| Sbjct 1246 TCTGGCGCAATAAAAAGCGCGA-AGAG 1221 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 132071572157000