Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Achipteria_20coleoptrata_20[genbank_20GCA_5F000988765.1_202015-05- 06] 56,345 sequences; 88,443,889 total letters Query= NC_028699.1 Length=40740 Score E Sequences producing significant alignments: (Bits) Value seq55013 111 4e-20 >seq55013 Length=475 Score = 111 bits (122), Expect = 4e-20 Identities = 179/257 (70%), Gaps = 3/257 (1%) Strand=Plus/Minus Query 27081 CGGCGACATTCATCCATCCATTCGGTAACGCAGATCGGATGGTTACGGTCCTTACGGTAA 27140 || |||||||| ||| |||| || || | | ||||| | ||||| || ||||| Sbjct 283 CGTCGACATTCCGTCATGAATTCAGTGACTTCGGTAGGATGATGGCGGTCTTTTCGGTAG 224 Query 27141 ATCCTGCATGTACATGATTCGTTATCCTGCTCAAAATCCATACCGTCAAACTGCTGGTTT 27200 || | ||| || || | | | || |||| ||| ||| || ||||| || | |||| Sbjct 223 ATACGGCAGGTGCAGGCCTGATCGTCTTGCTGAAACGTCATGCCATCAAAGTGTTCGTTT 164 Query 27201 TCGTTGATGATACGGGACCAGCCATCAACACCCACCACAGGGACGATCCCGTTCTGCTTA 27260 ||||| ||||| || ||||| ||||||| || || || || ||||| ||| ||| Sbjct 163 TCGTTAATGATGCGTGACCAACCATCAATGCCAACGACCGGCACGAT---GTTACCTTTA 107 Query 27261 TCAGGAAAGGCGTAAATTTCTTTCGTCCACGGATTAAGACCGTACTGGTTGGCGACTATC 27320 || ||||| ||||||||||| || || | ||||| || || || || |||| || || Sbjct 106 TCGGGAAAAGCGTAAATTTCCTTGGTAAAGGGATTGAGGCCATATTGACTGGCAACAATT 47 Query 27321 AGTAGCGCAATAAACTG 27337 || || ||| | || || Sbjct 46 AGCAGAGCAGTCAATTG 30 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 130159252540780