Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Achipteria_20coleoptrata_20[genbank_20GCA_5F000988765.1_202015-05- 06] 56,345 sequences; 88,443,889 total letters Query= NC_028762.1 Length=161989 Score E Sequences producing significant alignments: (Bits) Value seq54669 158 1e-33 seq6749 87.8 2e-12 >seq54669 Length=12211 Score = 158 bits (174), Expect = 1e-33 Identities = 317/465 (68%), Gaps = 4/465 (1%) Strand=Plus/Plus Query 137425 AAGCATCATACATACCAGGGATTTCATGTGGACTAAACAATGTAATATAATCATCATTAA 137484 |||| ||||| | ||| || | ||| ||||||||| | || || | || | || | Sbjct 11749 AAGCTTCATATAAACCCGGAACGTCAGATGGACTAAATAGAGTTATCTCTTCGTTTTTTA 11808 Query 137485 TTAGTCGTTCAATCATAAGGTCATTAATTTGAACACCATAATCTAAATGACGAATACGGT 137544 || || | | ||||| | ||||||||| || || ||||| | ||| |||| ||| | Sbjct 11809 CTAAACGCTGATACATAAATTTATTAATTTGTACCCCGTAATCCATATGGCGAACACGAT 11868 Query 137545 TTTCTTCAATACCTTTATTATTTTTAAGAACTAACAATTTTTCTAATTCAAGGTGCCACA 137604 | ||||||| ||| |||||||| | || |||| ||||||| || | ||||||| Sbjct 11869 TATCTTCAACACCACGGTTATTTTTTAATACCAACAGATTTTCTATCTCTAAATGCCACA 11928 Query 137605 TTGGGTAATATAAAGTAGCAGAACCACCTCGAATCCCACCTTGGGAACATGATTTTACAG 137664 || || |||| || || | |||||| || | || ||||| ||||| |||||||| | Sbjct 11929 GGGGAAAAAATAACGTTGCTGCACCACCACGCACACCTCCTTGAGAACAAGATTTTACCG 11988 Query 137665 ATGCCAAATGGGTTTTCCAAAATGGAATGACACCGGTATGGACAACTTCGCCAAATCCTA 137724 | | | | ||| |||| ||||| ||||||||| | | |||| ||| | | Sbjct 11989 CAGTCTGAAAGTGTTTATAAAACGGAATACAACCGGTATGAAAAGCTTCACCATGACGAA 12048 Query 137725 TTTTAGACCCTTCAGCCCT-ATACATACCGGCATTAATACCAATACCAGCTCTTTTAGAA 137783 || | |||| || | || | ||| |||||||||||||| || || | | ||| Sbjct 12049 TTCCACTACCTTGCGCACGGATGCG-ACCAGCATTAATACCAATCCCCGCGCGCTGCGAA 12107 Query 137784 ATGTATTTTACAATAGCTGCAT-TTGTTTCATTAATAGAATCTAAAGAATCACCGCTATC 137842 | ||||||| || || || | ||| |||| |||||||| ||| || || | || Sbjct 12108 ACATATTTTATGATTGC-GCTTGCTGTGGCATTGATAGAATCCAAACTGTCCCCACATTC 12166 Query 137843 AATAACTACGCAAGAACTAAATTGACGTGTTGGGGTTCTTACACC 137887 || | ||| ||||| |||||||| || || || || | |||||| Sbjct 12167 TATCAATACACAAGAGCTAAATTGGCGGGTAGGCGTACGTACACC 12211 >seq6749 Length=158988 Score = 87.8 bits (96), Expect = 2e-12 Identities = 58/63 (92%), Gaps = 1/63 (2%) Strand=Plus/Minus Query 64869 CTACAGGATTCGAACCTGTGACCTAGGGCTTAGAAGGTCCTTGCTCTATCCAACTGAGCT 64928 ||||||||||||||||||||||||| ||||||||||| | ||||||||||| ||||||| Sbjct 9019 CTACAGGATTCGAACCTGTGACCTACGGCTTAGAAGGCCGTTGCTCTATCC-GCTGAGCT 8961 Query 64929 AAG 64931 ||| Sbjct 8960 AAG 8958 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 517871799343800