Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Achipteria_20coleoptrata_20[genbank_20GCA_5F000988765.1_202015-05- 06] 56,345 sequences; 88,443,889 total letters Query= NC_028780.1 Length=167124 Score E Sequences producing significant alignments: (Bits) Value seq54669 161 1e-34 seq13760 91.5 2e-13 >seq54669 Length=12211 Score = 161 bits (178), Expect = 1e-34 Identities = 240/338 (71%), Gaps = 2/338 (1%) Strand=Plus/Minus Query 22918 AATATATCTCTAAACGCGCTGGAATTGGTATTAACGTTGGTATGATTCGTGCCGAAGGTT 22977 ||||| | || | ||||| || ||||||||||| | |||| || ||||| ||||| Sbjct 12114 AATATGTTTCGCAGCGCGCGGGGATTGGTATTAATGCTGGTCGCATCCGTGCGCAAGGTA 12055 Query 22978 CTAAGATTGG-CATGGGTGAAGTACGCCATACTGGTGTTATTCCTTTTTGGAAACATTTT 23036 | ||| | ||||| ||||| ||||| ||| |||||| |||| ||||| ||| Sbjct 12054 GTGGAATTCGTCATGG-TGAAGCTTTTCATACCGGTTGTATTCCGTTTTATAAACACTTT 11996 Query 23037 CAGACTGCTGTTAAATCATGTTCACAGGGCGGAATTCGTGGTGGCGCTGCTACTGCTTAT 23096 |||||||| || ||||| ||||| || || || | |||||||| || || || | | Sbjct 11995 CAGACTGCGGTAAAATCTTGTTCTCAAGGAGGTGTGCGTGGTGGTGCAGCAACGTTATTT 11936 Query 23097 TATCCTATTTGGCATTTGGAAGTTGAAAATCTTCTCGTTTTGAAAAATAACAAAGGTGTA 23156 | ||| | |||||||| || | |||||||| | || || ||||||||| ||||| Sbjct 11935 TTTCCCCTGTGGCATTTAGAGATAGAAAATCTGTTGGTATTAAAAAATAACCGTGGTGTT 11876 Query 23157 GAAGAAAACCGCATTCGTCATATGGATTATGGTGTTCAACTGAATGATCTAATGATGGAA 23216 ||||| || || |||| ||||||||||| || || ||| | ||| | | ||| | Sbjct 11875 GAAGATAATCGTGTTCGCCATATGGATTACGGGGTACAAATTAATAAATTTATGTATCAG 11816 Query 23217 CGTTTTGGAAAGAACGACTACATTACTTTGTTCAGTCC 23254 ||||| | ||| ||||| | || ||| | || ||||| Sbjct 11815 CGTTTAGTAAAAAACGAAGAGATAACTCTATTTAGTCC 11778 >seq13760 Length=57140 Score = 91.5 bits (100), Expect = 2e-13 Identities = 65/75 (87%), Gaps = 0/75 (0%) Strand=Plus/Plus Query 93009 GCGGATATCGTATAATGGTATTACCTCAGACTTCCAATCTGATGATGTGAGTTCGATTCT 93068 |||| || ||||||||| |||||||||| ||||||| ||||||||||| ||||||||| Sbjct 18286 GCGGGCATGGTATAATGGCATTACCTCAGCCTTCCAAGCTGATGATGTGGGTTCGATTCC 18345 Query 93069 CATTATCCGCTCCAA 93083 |||| ||||||||| Sbjct 18346 CATTGCCCGCTCCAA 18360 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 534292226080800