Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Achipteria_20coleoptrata_20[genbank_20GCA_5F000988765.1_202015-05- 06] 56,345 sequences; 88,443,889 total letters Query= NC_028829.1 Length=248088 Score E Sequences producing significant alignments: (Bits) Value seq54669 178 2e-39 >seq54669 Length=12211 Score = 178 bits (196), Expect = 2e-39 Identities = 302/436 (69%), Gaps = 4/436 (1%) Strand=Plus/Plus Query 236197 GGACTGAATAGCGTGATGTAATCGTTATTCACAAGACGCTCAAGCATCAATCGACTGATT 236256 ||||| ||||| || || | ||||| || || | ||||| | ||| ||| | | ||| Sbjct 11778 GGACTAAATAGAGTTATCTCTTCGTTTTTTACTAAACGCTGATACATAAATTTATTAATT 11837 Query 236257 GATACACTGTAGTCAAGATGACGAATACGGTTTTCTTCAACACCTTTGTTGTTCTTCAGA 236316 ||| | ||| || | ||| |||| ||| || ||||||||||| ||| || || | Sbjct 11838 TGTACCCCGTAATCCATATGGCGAACACGATTATCTTCAACACCACGGTTATTTTTTAAT 11897 Query 236317 ACTAACAGTTTTTCAACTTCTAAGTGCCAAATCGGGTAAGTTAGAGTCGCAGCACCACCA 236376 || ||||| ||||| | ||||| ||||| | || || || || || ||||||||| Sbjct 11898 ACCAACAGATTTTCTATCTCTAAATGCCACAGGGGAAAAAATAACGTTGCTGCACCACCA 11957 Query 236377 CGTACACCACCTTGAGAACACGATTTAACCGCAGTTTGAAAGTGTTTCCAGAATGGAATT 236436 || ||||| ||||||||||| ||||| |||||||| ||||||||||| | || ||||| Sbjct 11958 CGCACACCTCCTTGAGAACAAGATTTTACCGCAGTCTGAAAGTGTTTATAAAACGGAATA 12017 Query 236437 ACACCAGTGTGACGAATCTCACCTGAACGAA--CGACTGCCCCTTCAGCACGAATCGCAC 236494 ||| || ||| | ||||| ||||| | ||| |||| ||||| || || Sbjct 12018 CAACCGGTATGAAAAGCTTCACCATGACGAATTCCACT--ACCTTGCGCACGGATGCGAC 12075 Query 236495 CGCCATTCACACCGATACCTGCACGCTTACTAATGTAACTTACAATTGATTTAGCCACTT 236554 | |||| | ||| || || || |||| || || ||| |||| | || Sbjct 12076 CAGCATTAATACCAATCCCCGCGCGCTGCGAAACATATTTTATGATTGCGCTTGCTGTGG 12135 Query 236555 CATTGATTGAATGCAAAGAGTCGCCTGATTCAATCTTAACACACGAACTAAACTGGCGTG 236614 ||||||| |||| |||| ||| || |||| ||| ||||| || ||||| ||||| | Sbjct 12136 CATTGATAGAATCCAAACTGTCCCCACATTCTATCAATACACAAGAGCTAAATTGGCGGG 12195 Query 236615 TCGGGGTACGAACGCC 236630 | || ||||| || || Sbjct 12196 TAGGCGTACGTACACC 12211 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 793194549417600