Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Achipteria_20coleoptrata_20[genbank_20GCA_5F000988765.1_202015-05- 06] 56,345 sequences; 88,443,889 total letters Query= NC_028847.1 Length=170527 Score E Sequences producing significant alignments: (Bits) Value seq54669 168 7e-37 >seq54669 Length=12211 Score = 168 bits (186), Expect = 7e-37 Identities = 297/430 (69%), Gaps = 2/430 (0%) Strand=Plus/Plus Query 143867 GGACTAAACAACGTGATGTAATCATTTTTACCGAAACGTTCCATCATAAGGTCGTTCATC 143926 |||||||| | || || | || ||||| | ||||| | ||||| | || || Sbjct 11778 GGACTAAATAGAGTTATCTCTTCGTTTTTTACTAAACGCTGATACATAAATTTATTAATT 11837 Query 143927 TGGATTCCGTAGTCCATATGGCGAATACGGTTCTCATCGACACCTTTGTTGTTTTTCAGA 143986 || | ||||| ||||||||||||| ||| || || || ||||| ||| ||||| | Sbjct 11838 TGTACCCCGTAATCCATATGGCGAACACGATTATCTTCAACACCACGGTTATTTTTTAAT 11897 Query 143987 ACGAGCAGATTTTCAACTTCCAAATGCCAAATAGGATAATAAGCAGTAGCAGCGCCGCCA 144046 || | ||||||||| | || |||||||| | ||| || | || || || || ||| Sbjct 11898 ACCAACAGATTTTCTATCTCTAAATGCCACAGGGGAAAAAATAACGTTGCTGCACCACCA 11957 Query 144047 CGGATTCCACCTTGTGAACATGATTTAACAGCAGTCTGGAAATGTTTCCAGAATGGAATA 144106 || | || ||||| ||||| ||||| || |||||||| || ||||| | || |||||| Sbjct 11958 CGCACACCTCCTTGAGAACAAGATTTTACCGCAGTCTGAAAGTGTTTATAAAACGGAATA 12017 Query 144107 ACACCGGTATGCTTGACTTCGCCCATG-CCAATACGAGAACCTTCAGCACGAATCATACC 144165 ||||||||| |||| ||||| | ||| | | ||||| ||||| || ||| Sbjct 12018 CAACCGGTATGAAAAGCTTC-ACCATGACGAATTCCACTACCTTGCGCACGGATGCGACC 12076 Query 144166 AACGTTGATACCAATACCGGCACGTTTAGAAATGTATTCAATTATTGAGTTAGCAGTTTT 144225 | | || |||||||| || || || | |||| |||| || |||| | | || || Sbjct 12077 AGCATTAATACCAATCCCCGCGCGCTGCGAAACATATTTTATGATTGCGCTTGCTGTGGC 12136 Query 144226 GTTAATAGATTTCAGTGAGTCGCCTGCTTCAATAACCACACAAGAACTAAATTGACGGGT 144285 || ||||| | || ||| || ||| || | |||||||| |||||||| ||||| Sbjct 12137 ATTGATAGAATCCAAACTGTCCCCACATTCTATCAATACACAAGAGCTAAATTGGCGGGT 12196 Query 144286 TGGTGTACGT 144295 || |||||| Sbjct 12197 AGGCGTACGT 12206 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 545174156399400