Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Achipteria_20coleoptrata_20[genbank_20GCA_5F000988765.1_202015-05- 06] 56,345 sequences; 88,443,889 total letters Query= NC_028956.1 Length=52139 Score E Sequences producing significant alignments: (Bits) Value seq55013 109 2e-19 >seq55013 Length=475 Score = 109 bits (120), Expect = 2e-19 Identities = 233/345 (68%), Gaps = 16/345 (5%) Strand=Plus/Minus Query 35086 ATACGCTCTGCTTCGTCTTGGTCGTAAATACCCGTAAAGCCAAAGGCTAATCTTGCACAT 35145 || ||||| ||||||||| |||| ||||| |||| ||| ||||| || || | |||||| Sbjct 403 ATTCGCTCAGCTTCGTCTGGGTCATAAATCCCCGCAAACCCAAATGCCAAGCGGGCACAT 344 Query 35146 TGGATCATTGCTTTATGGCGTAACATTCTTTTTGGGTGAGAGTTCCAAG---CTGGAGAG 35202 || ||||| ||||||||||||||||| | ||||| ||| || ||| | ||| || | Sbjct 343 TGAATCATGGCTTTATGGCGTAACATGCGCTTTGGATGACTGTGCCATGGGCCTGTAGGG 284 Query 35203 CTCTTTTTACATTCCCCCATAAATTCCGTCACCACAATCGGTTTACTTCTATCTTTACGG 35262 | | ||||||| ||| ||||| || || | | || | | | ||||| ||| Sbjct 283 C---GTCGACATTCCGTCATGAATTCAGTGACTTCGGTAGGATGATGGCGGTCTTTTCGG 227 Query 35263 TAGATAGTACAAGTACAGGCGGAATAGTCATCGGTAAAATGAAATTCCATTCCATCATAT 35322 |||||| || || ||||| || ||| | ||||| ||| |||||| | Sbjct 226 TAGATACGGCAGGTGCAGGCCTGATCGTCTT------GCTGAAACGTCATGCCATCAAAG 173 Query 35323 TGAGGCTCACGGTTAATAATGCGAACCCAACCATCAACGCCGACAATAGGCGTTAATCCA 35382 || | |||||| ||||| ||||||||||| ||| || | ||| | | Sbjct 172 TGTTCGTTTTCGTTAATGATGCGTGACCAACCATCAATGCCAACGACCGGCACGATGTTA 113 Query 35383 CCGTTCCCACCGGGGAATGCATAAATTTCTTTTGTCCAAGGGTTT 35427 || || | |||| || || |||||||| || || ||||| || Sbjct 112 CCTTT---ATCGGGAAAAGCGTAAATTTCCTTGGT-AAAGGGATT 72 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 166611646027890