Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Achipteria_20coleoptrata_20[genbank_20GCA_5F000988765.1_202015-05- 06] 56,345 sequences; 88,443,889 total letters Query= NC_029042.1 Length=156833 Score E Sequences producing significant alignments: (Bits) Value seq54669 105 7e-18 seq4872 86.0 6e-12 seq11509 82.4 8e-11 >seq54669 Length=12211 Score = 105 bits (116), Expect = 7e-18 Identities = 260/385 (68%), Gaps = 11/385 (3%) Strand=Plus/Minus Query 102633 GGCGTCCGCACCCCGACCCGACAGTTCAGCTCTTGTGTATTGAT-CAAACTGGTGACACA 102691 || || || || || ||||| || || ||||||||||||||||| || ||| |||| Sbjct 12211 GGTGTACGTACGCCTACCCGCCAATTTAGCTCTTGTGTATTGATAGAATGTGGGGACAGT 12152 Query 102692 TTGGACTCAATTAATGCCACTGCGAAAAGC-ATCGTGGATTATGTTTCCAAACGTGCTGG 102750 ||||| || || |||||||| || || || ||| | | |||||||| | || || || Sbjct 12151 TTGGATTCTATCAATGCCACAGC-AAGCGCAATCATAAAATATGTTTCGCAGCGCGCGGG 12093 Query 102751 CATCGGATTCGATGTTGGGGCAATTCGTG-GCATTGGTAGCCCTATCCGTAAAGGGGAAA 102809 || || | ||| ||| || |||| ||| ||||| || ||| | || ||| Sbjct 12092 GATTGGTATTAATGCTGGTCGCATCCGTGCGCA-AGGTAGTGGAATTCGTCATGGTGAAG 12034 Query 102810 TGGTCCATACAGGTCTGGTTCC-ATTCATCAAGTATTT--GACTGGTGCCCTGAAGTCTT 102866 | ||||| ||| |||| || || || ||| ||| ||| | || |||| Sbjct 12033 CTTTTCATACCGGTTGTATTCCGTTTTATAAACACTTTCAGAC---TGCGGTAAAATCTT 11977 Query 102867 GCTCTCAAGGCGGTATCCGTGGTGGATCGGCAACATGCTATGTTCCCATCTGGCATTATC 102926 | |||||||| ||| | |||||||| | ||||| | | | ||||| | ||||||| Sbjct 11976 GTTCTCAAGGAGGTGTGCGTGGTGGTGCAGCAACGTTATTTTTTCCCCTGTGGCATTTAG 11917 Query 102927 AATTTGATGATGTCGTTGTTCTCAAAAACAACCGTGGATTGGAAGAGAACCGTGAACGCC 102986 | | || || | | || | ||||| |||||||| | ||||| || |||| |||| Sbjct 11916 AGATAGAAAATCTGTTGGTATTAAAAAATAACCGTGGTGTTGAAGATAATCGTGTTCGCC 11857 Query 102987 GTATCGACTATGGGATTCAGATTAA 103011 ||| || || ||| | || ||||| Sbjct 11856 ATATGGATTACGGGGTACAAATTAA 11832 >seq4872 Length=25388 Score = 86.0 bits (94), Expect = 6e-12 Identities = 56/62 (90%), Gaps = 0/62 (0%) Strand=Plus/Minus Query 18964 TGGCAGGACTTGAACCTGCGACATACGGTTTAACAGACCGCCGTTCTACCGACTGAACTA 19023 |||| ||||| ||||| ||||||||||| ||||||| ||||||||||||| ||||||||| Sbjct 1077 TGGCTGGACTCGAACCAGCGACATACGGATTAACAGTCCGCCGTTCTACCAACTGAACTA 1018 Query 19024 CA 19025 || Sbjct 1017 CA 1016 >seq11509 Length=51200 Score = 82.4 bits (90), Expect = 8e-11 Identities = 65/77 (84%), Gaps = 1/77 (1%) Strand=Plus/Minus Query 19440 TAGTGGTGACCCTGGCTGGACTTGAACCAGCGACCAATCGATTATGAGTCGACTGCTCTA 19499 || ||||| ||| |||||| | |||||||||||| | ||||||||||||| ||||||| Sbjct 32006 TATTGGTGGCCCCTGCTGGATTCGAACCAGCGACCCAGCGATTATGAGTCGCTTGCTCTA 31947 Query 19500 ACC-ACTGAGCTACGGG 19515 ||| ||||||||| ||| Sbjct 31946 ACCAACTGAGCTAAGGG 31930 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 501384219936600