Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Achipteria_20coleoptrata_20[genbank_20GCA_5F000988765.1_202015-05- 06] 56,345 sequences; 88,443,889 total letters Query= NC_029692.1 Length=362276 Score E Sequences producing significant alignments: (Bits) Value seq669 154 3e-32 seq17432 152 1e-31 seq214 123 6e-23 >seq669 Length=42814 Score = 154 bits (170), Expect = 3e-32 Identities = 162/213 (76%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 ||||| | ||||| || ||||||||||||||||| ||||| | || || | || || Sbjct 31858 AGGACTAAATGAAGGGTTGACTCTTTTTGGATGTTGTAATCAGAGAGAGTGCGGCCGTCC 31917 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022 || | ||| ||||| || |||||||| | ||||| || ||||||| |||||||||||| Sbjct 31918 TCTAACTGTTTGCCCGCAAAGATAAGTCTCTGTTGATCCGGAGGAATGCCTTCCTTGTCC 31977 Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082 || |||||| || |||||||||||||| || ||| || || || | ||| || ||| Sbjct 31978 TGAATCTTTGCCTTAACGTTTTCGATGGTATCGGAGGCCTCCACTTCCAAAGTAATTGTC 32037 Query 211083 TTTCCCGTGAGAGTCTTTACAAACACCTGCATT 211115 ||||| ||||| || || || || | |||||| Sbjct 32038 TTTCCGGTGAGGGTTTTCACGAATATTTGCATT 32070 Score = 147 bits (162), Expect = 5e-30 Identities = 155/204 (76%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 210912 TGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCCAGCTGC 210971 || ||||| ||||| || || ||||| ||||| | || || | || || || | ||| Sbjct 31639 TGGAGAGTCGACTCCTTCTGAATGTTGTAATCAGAGAGAGTGCGGCCGTCCTCTAACTGT 31698 Query 210972 TTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATCTTT 211031 ||||| || |||||||| | ||||| || ||||||| |||||||||||||| |||||| Sbjct 31699 TTGCCCGCAAAGATAAGTCTCTGTTGATCCGGAGGAATACCTTCCTTGTCCTGAATCTTT 31758 Query 211032 TGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTTCCCGTG 211091 ||||||||||||||||| || || || || || | ||| || |||||||| ||| Sbjct 31759 GCCTTCACGTTTTCGATGGTATCCGAAGCCTCCACTTCCAAAGTAATGGTCTTTCCGGTG 31818 Query 211092 AGAGTCTTTACAAACACCTGCATT 211115 || ||||| || || | ||||||| Sbjct 31819 AGGGTCTTCACGAATATCTGCATT 31842 Score = 105 bits (116), Expect = 2e-17 Identities = 97/123 (79%), Gaps = 0/123 (0%) Strand=Plus/Plus Query 210993 TGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTG 211052 ||||| || ||||||| |||||||||||||| |||||| || ||||||||||||||| Sbjct 32174 TGTTGATCGGGAGGAATGCCTTCCTTGTCCTGAATCTTTGCCTTAACGTTTTCGATGGTG 32233 Query 211053 TCAGAGCTTTCAACCTCGAGAGTGATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGC 211112 || ||| || || || | ||| || |||||||| ||||| || || || || | |||| Sbjct 32234 TCGGAGGCCTCCACTTCCAAAGTAATTGTCTTTCCGGTGAGGGTTTTCACGAATATCTGC 32293 Query 211113 ATT 211115 ||| Sbjct 32294 ATT 32296 >seq17432 Length=31749 Score = 152 bits (168), Expect = 1e-31 Identities = 156/204 (76%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 210912 TGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCCAGCTGC 210971 ||||| || ||||| ||||| ||||||||||| | ||| || | || ||||||| ||| Sbjct 24568 TGAAGGGTCGACTCCTTTTGAATGTTATAATCGGAAAGAGTGCGCCCGTCTTCCAACTGT 24509 Query 210972 TTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATCTTT 211031 ||||| |||||||| || | ||||||||| ||||| | ||||| || || ||||| || Sbjct 24508 TTGCCGGCGAAGATCAGTCTTTGTTGGTCGGGAGGGATGCCTTCTTTATCTTGGATTTTG 24449 Query 211032 TGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTTCCCGTG 211091 || ||||| || |||||||| ||| || ||||| || || || || ||||| || Sbjct 24448 GCCTTAACGTTCTCAATGGTGTCGGAGGGCTCCACCTCAAGGGTTATGGTTTTTCCGGTC 24389 Query 211092 AGAGTCTTTACAAACACCTGCATT 211115 |||||||| ||||| | |||||| Sbjct 24388 AGAGTCTTAACAAAGATTTGCATT 24365 Score = 129 bits (142), Expect = 1e-24 Identities = 151/204 (74%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 210912 TGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCCAGCTGC 210971 |||||||| ||||| ||||| || ||||| || | || || | || ||||| || || Sbjct 24796 TGAAGAGTCGACTCCTTTTGAATATTATAGTCAGAGAGTGTTCGGCCGTCTTCTAGTTGT 24737 Query 210972 TTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATCTTT 211031 ||||| ||||||||||| || ||||| || ||||||| || || |||||||| || || Sbjct 24736 TTGCCGGCGAAGATAAGACGCTGTTGATCCGGAGGAATACCCTCTTTGTCCTGAATTTTC 24677 Query 211032 TGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTTCCCGTG 211091 |||||||| || |||||||| || || || || | |||||| |||||||| || Sbjct 24676 GCCTTCACGTTCTCAATGGTGTCCGACGGCTCCACTTCCAAAGTGATGGTCTTTCCGGTC 24617 Query 211092 AGAGTCTTTACAAACACCTGCATT 211115 | || || || || | |||||| Sbjct 24616 AATGTTTTGACGAATATTTGCATT 24593 Score = 125 bits (138), Expect = 2e-23 Identities = 150/204 (74%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 210912 TGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCCAGCTGC 210971 ||||| || ||||| ||||| || || || || | ||| || | || |||||||| || Sbjct 25024 TGAAGGGTCGACTCCTTTTGAATATTGTAGTCGGAAAGAGTGCGCCCGTCTTCCAGTTGT 24965 Query 210972 TTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATCTTT 211031 ||||| |||||||| | ||||| || || ||||||| ||||| ||||| || ||||| Sbjct 24964 TTGCCAGCGAAGATCAATCGTTGCTGATCCGGAGGAATCCCTTCTTTGTCTTGAATCTTA 24905 Query 211032 TGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTTCCCGTG 211091 || || || ||||||||||| || || || || | |||||| |||||||| || Sbjct 24904 GCCTTTACATTCTCGATGGTGTCCGACGGCTCCACTTCCAAAGTGATGGTCTTTCCGGTC 24845 Query 211092 AGAGTCTTTACAAACACCTGCATT 211115 | ||||| || || | |||||| Sbjct 24844 AATGTCTTCACGAATATTTGCATT 24821 >seq214 Length=17119 Score = 123 bits (136), Expect = 6e-23 Identities = 160/221 (72%), Gaps = 0/221 (0%) Strand=Plus/Plus Query 210897 AGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTT 210956 ||||| || || | ||||| || ||||| ||||||||||| ||||| ||| || || Sbjct 965 AGTCTCAGCACCAAATGAAGGGTCGACTCCTTTTGGATGTTGTAATCGCTAAGAGTTCTG 1024 Query 210957 CCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCC 211016 || ||||| | || ||||| || ||||| | || || || || ||||| | || ||| Sbjct 1025 CCGTCTTCTAATTGTTTGCCAGCAAAGATCAACCGCTGCTGATCCGGAGGTATGCCCTCC 1084 Query 211017 TTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTG 211076 |||||||| |||||| || || || || || || || | || ||||| |||||| Sbjct 1085 TTGTCCTGAATCTTTGCCTTTACATTCTCAATAGTATCGCTGGGCTCCACCTCAAGAGTG 1144 Query 211077 ATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCATTTT 211117 || ||||| ||||| | ||||| || || | |||||||| Sbjct 1145 ATGGTCTTACCCGTCAACGTCTTGACGAAGATTTGCATTTT 1185 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1158315184625925