Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Achipteria_20coleoptrata_20[genbank_20GCA_5F000988765.1_202015-05- 06] 56,345 sequences; 88,443,889 total letters Query= NC_029997.1 Length=105667 Score E Sequences producing significant alignments: (Bits) Value seq669 165 6e-36 seq214 131 1e-25 seq17432 123 2e-23 >seq669 Length=42814 Score = 165 bits (182), Expect = 6e-36 Identities = 181/241 (75%), Gaps = 0/241 (0%) Strand=Plus/Minus Query 23598 TTAATTACTTAAAATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGA 23657 || ||||| |||||||| || || || ||||||||||| ||||| || |||||||| || Sbjct 32536 TTTATTACAGAAAATGCAAATATTTGTGAAAACCCTCACCGGAAAGACTATCACTCTTGA 32477 Query 23658 AGTTGACTCCACGGACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGT 23717 || || || | |||||| | |||| |||| ||| ||| ||||||||||| | Sbjct 32476 GGTCGAGCCCTCTGACACTATCGAAAATGTAAAGGCAAAGATTCAGGACAAAGAAGGCAT 32417 Query 23718 ACCGCCAGATCAACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTT 23777 || || ||||| ||| | || |||||||| |||||||| | ||||||| ||||||| | Sbjct 32416 TCCTCCGGATCAGCAGAGATTGATATTTGCGGGCAAACAGTTAGAAGACGGACGCACTCT 32357 Query 23778 AGGCGATTACAACATACAAAAAGAGTCCACATTACATTTAGTTTTAAGGTTGCGAGGAGG 23837 ||||||||||| || || ||||| || | ||||||||| | | ||| ||||||| Sbjct 32356 CTCTGATTACAACATTCAGAAGGAGTCAACCCTTCATTTAGTTCTTCGTTTGAGAGGAGG 32297 Query 23838 A 23838 | Sbjct 32296 A 32296 Score = 129 bits (142), Expect = 4e-25 Identities = 166/229 (72%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 23610 AATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCAC 23669 |||||| || ||||| ||||||||||| ||||| || || ||| | ||||| || || | Sbjct 32070 AATGCAAATATTCGTGAAAACCCTCACCGGAAAGACAATTACTTTGGAAGTGGAGGCCTC 32011 Query 23670 GGACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729 || || | |||| | || ||| ||| ||||| ||||| | || || ||||| Sbjct 32010 CGATACCATCGAAAACGTTAAGGCAAAGATTCAGGACAAGGAAGGCATTCCTCCGGATCA 31951 Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789 |||| | | || ||||| |||||||| | || |||| |||||| | |||||||| Sbjct 31950 ACAGAGACTTATCTTTGCGGGCAAACAGTTAGAGGACGGCCGCACTCTCTCTGATTACAA 31891 Query 23790 CATACAAAAAGAGTCCACATTACATTTAGTTTTAAGGTTGCGAGGAGGA 23838 ||| ||||||||||| || | |||||||| | | ||| |||||||| Sbjct 31890 CATCCAAAAAGAGTCAACCCTTCATTTAGTCCTTCGTTTGAGAGGAGGA 31842 Score = 125 bits (138), Expect = 5e-24 Identities = 165/229 (72%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 23610 AATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCAC 23669 ||||||||| ||||| || |||||||| ||||| || || ||| | ||||| || | | Sbjct 31842 AATGCAGATATTCGTGAAGACCCTCACCGGAAAGACCATTACTTTGGAAGTGGAGGCTTC 31783 Query 23670 GGACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729 ||| || | |||| | || ||| ||| ||||| |||||| | || || ||||| Sbjct 31782 GGATACCATCGAAAACGTGAAGGCAAAGATTCAGGACAAGGAAGGTATTCCTCCGGATCA 31723 Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789 |||| | | || ||||| |||||||| | || |||| |||||| | |||||||| Sbjct 31722 ACAGAGACTTATCTTTGCGGGCAAACAGTTAGAGGACGGCCGCACTCTCTCTGATTACAA 31663 Query 23790 CATACAAAAAGAGTCCACATTACATTTAGTTTTAAGGTTGCGAGGAGGA 23838 ||| || || ||||| || | ||||| ||| | | ||| |||||||| Sbjct 31662 CATTCAGAAGGAGTCGACTCTCCATTTGGTTCTTCGTTTGAGAGGAGGA 31614 >seq214 Length=17119 Score = 131 bits (144), Expect = 1e-25 Identities = 167/230 (73%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 23608 AAAATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCC 23667 |||||||| || ||||| || || | ||||| || || |||||||| || || || || Sbjct 1185 AAAATGCAAATCTTCGTCAAGACGTTGACGGGTAAGACCATCACTCTTGAGGTGGAGCCC 1126 Query 23668 ACGGACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGAT 23727 | || ||| |||| | |||| ||| ||| ||||| || || |||| || ||| Sbjct 1125 AGCGATACTATTGAGAATGTAAAGGCAAAGATTCAGGACAAGGAGGGCATACCTCCGGAT 1066 Query 23728 CAACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTAC 23787 || ||||| || || ||||| ||||||||| | ||||||| | ||| | |||||||| Sbjct 1065 CAGCAGCGGTTGATCTTTGCTGGCAAACAATTAGAAGACGGCAGAACTCTTAGCGATTAC 1006 Query 23788 AACATACAAAAAGAGTCCACATTACATTTAGTTTTAAGGTTGCGAGGAGG 23837 ||||| ||||| ||||| || | ||||| || | || || ||||||| Sbjct 1005 AACATCCAAAAGGAGTCGACCCTTCATTTGGTGCTGAGACTGAGAGGAGG 956 >seq17432 Length=31749 Score = 123 bits (136), Expect = 2e-23 Identities = 166/231 (72%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 23608 AAAATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCC 23667 |||||||| |||||||| ||||| | || |||||||| || || || || || || || Sbjct 23743 AAAATGCAAATTTTCGTGAAAACGTTGACCGGAAAAACCATTACCCTTGAGGTGGAGCCC 23802 Query 23668 ACGGACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGAT 23727 | ||||| |||| | | || || ||| |||||||| || | || || || Sbjct 23803 TCCGACACCATTGAGAACGTGAAGGCCAAGATTCAGGACAAAGAGGGCATCCCTCCCGAC 23862 Query 23728 CAACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTAC 23787 |||||| | | || ||||| ||||||||||| ||||||| |||||| | ||||||| Sbjct 23863 CAACAGAGACTGATCTTTGCGGGCAAACAACTAGAAGACGGCCGCACTCTCTCCGATTAC 23922 Query 23788 AACATACAAAAAGAGTCCACATTACATTTAGTTTTAAGGTTGCGAGGAGGA 23838 ||||| ||||| ||||| || | ||||| || | | || |||||||| Sbjct 23923 AACATTCAAAAGGAGTCAACCCTTCATTTGGTACTCCGTCTGAGAGGAGGA 23973 Score = 116 bits (128), Expect = 2e-21 Identities = 163/229 (71%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 23610 AATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCAC 23669 ||||||||| ||||| || || || || ||||| || || ||| | ||||| || | | Sbjct 24137 AATGCAGATATTCGTCAAGACTCTGACCGGAAAGACAATTACTTTGGAAGTGGAGCCGTC 24196 Query 23670 GGACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729 |||||| |||| | |||| ||||| |||||||||||| | || || ||||| Sbjct 24197 GGACACCATTGAGAACGTAAAGGCCAAAATCCAAGACAAAGAAGGTATTCCTCCGGATCA 24256 Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789 |||| | | || ||||| ||||||||||| ||||||| || || | ||||| || Sbjct 24257 ACAGAGACTGATCTTTGCGGGCAAACAACTAGAAGACGGCCGAACACTCTCTGATTATAA 24316 Query 23790 CATACAAAAAGAGTCCACATTACATTTAGTTTTAAGGTTGCGAGGAGGA 23838 || ||||| ||||| || | ||||| || | | || |||||||| Sbjct 24317 TATTCAAAAGGAGTCGACTCTTCATTTGGTACTCCGTCTGAGAGGAGGA 24365 Score = 116 bits (128), Expect = 2e-21 Identities = 163/229 (71%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 23610 AATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCAC 23669 |||||| || ||||| ||||| | || ||||| || |||||| | ||||| || | | Sbjct 24593 AATGCAAATATTCGTCAAAACATTGACCGGAAAGACCATCACTTTGGAAGTGGAGCCGTC 24652 Query 23670 GGACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729 |||||| |||| | | || |||||| |||||||| ||| | || || ||||| Sbjct 24653 GGACACCATTGAGAACGTGAAGGCGAAAATTCAGGACAAAGAGGGTATTCCTCCGGATCA 24712 Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789 ||||||| | || || |||||||||||||| ||||||| || || | || || || Sbjct 24713 ACAGCGTCTTATCTTCGCCGGCAAACAACTAGAAGACGGCCGAACACTCTCTGACTATAA 24772 Query 23790 CATACAAAAAGAGTCCACATTACATTTAGTTTTAAGGTTGCGAGGAGGA 23838 || ||||| ||||| || | ||||| || | | || |||||||| Sbjct 24773 TATTCAAAAGGAGTCGACTCTTCATTTGGTACTCCGTCTGAGAGGAGGA 24821 Score = 113 bits (124), Expect = 3e-20 Identities = 151/210 (72%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 23610 AATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCAC 23669 |||||| || ||||| || || | || ||||| || |||||| | ||||| || | | Sbjct 24821 AATGCAAATATTCGTGAAGACATTGACCGGAAAGACCATCACTTTGGAAGTGGAGCCGTC 24880 Query 23670 GGACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729 |||||| | || | |||| || ||| ||||||||||| | || || ||||| Sbjct 24881 GGACACCATCGAGAATGTAAAGGCTAAGATTCAAGACAAAGAAGGGATTCCTCCGGATCA 24940 Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789 || || || || || || ||||||||||||||||||| |||||| | ||| ||||| Sbjct 24941 GCAACGATTGATCTTCGCTGGCAAACAACTGGAAGACGGGCGCACTCTTTCCGACTACAA 25000 Query 23790 CATACAAAAAGAGTCCACATTACATTTAGT 23819 || ||||| ||||| || | ||||| || Sbjct 25001 TATTCAAAAGGAGTCGACCCTTCATTTGGT 25030 Score = 111 bits (122), Expect = 1e-19 Identities = 164/230 (71%), Gaps = 2/230 (1%) Strand=Plus/Plus Query 23610 AATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCAC 23669 |||||| || || ||||| || || || |||||||| || || || || || || || | Sbjct 24365 AATGCAAATCTTTGTTAAGACTCTGACCGGAAAAACCATAACCCTTGAGGTGGAGCCCTC 24424 Query 23670 GGACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATC 23728 ||||| |||| || |||| | |||| | || |||||||| | || || || | Sbjct 24425 CGACACCATTGAGAACGTTAAGGCCAAAA-TCCAAGATAAAGAAGGCATCCCTCCCGACC 24483 Query 23729 AACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACA 23788 |||| | | || || ||||||||||| ||||||||| |||||| | |||||| | Sbjct 24484 AACAAAGACTGATCTTCGCCGGCAAACAGTTGGAAGACGGGCGCACTCTTTCCGATTATA 24543 Query 23789 ACATACAAAAAGAGTCCACATTACATTTAGTTTTAAGGTTGCGAGGAGGA 23838 |||| ||||| ||||| || | ||||| || | | ||| |||||||| Sbjct 24544 ACATTCAAAAGGAGTCGACCCTTCATTTGGTACTCCGTTTGAGAGGAGGA 24593 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 337777487223260