Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Achipteria_20coleoptrata_20[genbank_20GCA_5F000988765.1_202015-05- 06] 56,345 sequences; 88,443,889 total letters Query= NC_030230.1 Length=372707 Score E Sequences producing significant alignments: (Bits) Value seq17432 143 6e-29 seq669 136 9e-27 seq11859 125 2e-23 seq10797 125 2e-23 seq9107 107 5e-18 seq54714 93.3 1e-13 seq54289 93.3 1e-13 seq47028 93.3 1e-13 seq18933 87.8 4e-12 >seq17432 Length=31749 Score = 143 bits (158), Expect = 6e-29 Identities = 154/204 (75%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 225511 TGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCTTCTAGCTGC 225570 || || || || || ||||| | |||||| |||| | ||| | ||| ||||| || || Sbjct 25024 TGAAGGGTCGACTCCTTTTGAATATTGTAGTCGGAAAGAGTGCGCCCGTCTTCCAGTTGT 24965 Query 225571 TTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCTTGGATCTTT 225630 || ||||||||||| | |||||| || || || ||||| ||||| |||||||| ||||| Sbjct 24964 TTGCCAGCGAAGATCAATCGTTGCTGATCCGGAGGAATCCCTTCTTTGTCTTGAATCTTA 24905 Query 225631 TGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTCTTGCCCGTC 225690 ||| ||| ||||||||||| || | ||||| || || ||||| ||||| || ||| Sbjct 24904 GCCTTTACATTCTCGATGGTGTCCGACGGCTCCACTTCCAAAGTGATGGTCTTTCCGGTC 24845 Query 225691 AAAGTTTTTATGAACACTTGCATT 225714 || || || | ||| | ||||||| Sbjct 24844 AATGTCTTCACGAATATTTGCATT 24821 Score = 129 bits (142), Expect = 1e-24 Identities = 151/204 (74%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 225511 TGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCTTCTAGCTGC 225570 || ||||| || || ||||| | ||| || || | | |||| || |||||||| || Sbjct 24796 TGAAGAGTCGACTCCTTTTGAATATTATAGTCAGAGAGTGTTCGGCCGTCTTCTAGTTGT 24737 Query 225571 TTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCTTGGATCTTT 225630 || || ||||||||||| || ||||| || || |||||||| || ||||| || || || Sbjct 24736 TTGCCGGCGAAGATAAGACGCTGTTGATCCGGAGGAATACCCTCTTTGTCCTGAATTTTC 24677 Query 225631 TGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTCTTGCCCGTC 225690 |||||| || |||||||| || | ||||| || || ||||| ||||| || ||| Sbjct 24676 GCCTTCACGTTCTCAATGGTGTCCGACGGCTCCACTTCCAAAGTGATGGTCTTTCCGGTC 24617 Query 225691 AAAGTTTTTATGAACACTTGCATT 225714 || ||||| | ||| | ||||||| Sbjct 24616 AATGTTTTGACGAATATTTGCATT 24593 Score = 123 bits (136), Expect = 6e-23 Identities = 151/206 (73%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 225511 TGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCTTCTAGCTGC 225570 || || || || || ||||| | |||||||||| | ||| | || |||||||| || Sbjct 23948 TGAAGGGTTGACTCCTTTTGAATGTTGTAATCGGAGAGAGTGCGGCCGTCTTCTAGTTGT 23889 Query 225571 TTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCTTGGATCTTT 225630 || || || ||||| |||| ||||||||||| || || || || ||||| || ||||| Sbjct 23888 TTGCCCGCAAAGATCAGTCTCTGTTGGTCGGGAGGGATGCCCTCTTTGTCCTGAATCTTG 23829 Query 225631 TGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTCTTGCCCGTC 225690 |||||| || |||||||| |||| ||||| || | || || || || || ||| Sbjct 23828 GCCTTCACGTTCTCAATGGTGTCGGAGGGCTCCACCTCAAGGGTAATGGTTTTTCCGGTC 23769 Query 225691 AAAGTTTTTATGAACACTTGCATTTT 225716 || ||||| | ||| | ||||||||| Sbjct 23768 AACGTTTTCACGAAAATTTGCATTTT 23743 Score = 120 bits (132), Expect = 7e-22 Identities = 149/204 (73%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 225511 TGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCTTCTAGCTGC 225570 || ||||| || || ||||| | ||| ||||| | | |||| || |||||||| || Sbjct 24340 TGAAGAGTCGACTCCTTTTGAATATTATAATCAGAGAGTGTTCGGCCGTCTTCTAGTTGT 24281 Query 225571 TTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCTTGGATCTTT 225630 || || || ||||| |||| ||||| || || ||||||||||| ||||||||||| || Sbjct 24280 TTGCCCGCAAAGATCAGTCTCTGTTGATCCGGAGGAATACCTTCTTTGTCTTGGATTTTG 24221 Query 225631 TGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTCTTGCCCGTC 225690 ||| || || |||||||| || | ||||| || || || || ||||| || ||| Sbjct 24220 GCCTTTACGTTCTCAATGGTGTCCGACGGCTCCACTTCCAAAGTAATTGTCTTTCCGGTC 24161 Query 225691 AAAGTTTTTATGAACACTTGCATT 225714 | ||| || | ||| | |||||| Sbjct 24160 AGAGTCTTGACGAATATCTGCATT 24137 Score = 116 bits (128), Expect = 9e-21 Identities = 148/204 (73%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 225511 TGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCTTCTAGCTGC 225570 || || || || || ||||| | || ||||||| | ||| | ||| ||||| | ||| Sbjct 24568 TGAAGGGTCGACTCCTTTTGAATGTTATAATCGGAAAGAGTGCGCCCGTCTTCCAACTGT 24509 Query 225571 TTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCTTGGATCTTT 225630 || || |||||||| |||| |||||||||||| || || ||||| || |||||||| || Sbjct 24508 TTGCCGGCGAAGATCAGTCTTTGTTGGTCGGGAGGGATGCCTTCTTTATCTTGGATTTTG 24449 Query 225631 TGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTCTTGCCCGTC 225690 ||| || || |||||||| |||| ||||| || | || || || || || ||| Sbjct 24448 GCCTTAACGTTCTCAATGGTGTCGGAGGGCTCCACCTCAAGGGTTATGGTTTTTCCGGTC 24389 Query 225691 AAAGTTTTTATGAACACTTGCATT 225714 | ||| || | || | ||||||| Sbjct 24388 AGAGTCTTAACAAAGATTTGCATT 24365 >seq669 Length=42814 Score = 136 bits (150), Expect = 9e-27 Identities = 158/213 (74%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561 ||||| | || || || || |||||||||| |||||||| | | ||| | || || Sbjct 31858 AGGACTAAATGAAGGGTTGACTCTTTTTGGATGTTGTAATCAGAGAGAGTGCGGCCGTCC 31917 Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621 |||| ||| || || || |||||||||| ||||| || || ||||| ||||||||||| Sbjct 31918 TCTAACTGTTTGCCCGCAAAGATAAGTCTCTGTTGATCCGGAGGAATGCCTTCCTTGTCC 31977 Query 225622 TGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTC 225681 || |||||| ||| || ||||||||| || |||| ||||| || || || || ||| Sbjct 31978 TGAATCTTTGCCTTAACGTTTTCGATGGTATCGGAGGCCTCCACTTCCAAAGTAATTGTC 32037 Query 225682 TTGCCCGTCAAAGTTTTTATGAACACTTGCATT 225714 || || || | ||||| | ||| | ||||||| Sbjct 32038 TTTCCGGTGAGGGTTTTCACGAATATTTGCATT 32070 Score = 125 bits (138), Expect = 2e-23 Identities = 150/204 (74%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 225511 TGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCTTCTAGCTGC 225570 |||||||| || || || || | |||||||| | | ||| | || || |||| ||| Sbjct 31639 TGGAGAGTCGACTCCTTCTGAATGTTGTAATCAGAGAGAGTGCGGCCGTCCTCTAACTGT 31698 Query 225571 TTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCTTGGATCTTT 225630 || || || |||||||||| ||||| || || ||||||||||||||||| || |||||| Sbjct 31699 TTGCCCGCAAAGATAAGTCTCTGTTGATCCGGAGGAATACCTTCCTTGTCCTGAATCTTT 31758 Query 225631 TGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTCTTGCCCGTC 225690 |||||| ||||||||| || || | ||||| || || || || ||||| || || Sbjct 31759 GCCTTCACGTTTTCGATGGTATCCGAAGCCTCCACTTCCAAAGTAATGGTCTTTCCGGTG 31818 Query 225691 AAAGTTTTTATGAACACTTGCATT 225714 | || || | ||| | |||||| Sbjct 31819 AGGGTCTTCACGAATATCTGCATT 31842 Score = 95.1 bits (104), Expect = 3e-14 Identities = 100/132 (76%), Gaps = 0/132 (0%) Strand=Plus/Plus Query 225583 ATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCTTGGATCTTTTGCTTCACAGCT 225642 || |||| ||||| ||||| ||||| ||||||||||| || |||||| ||| || | Sbjct 32165 ATCAGTCTCTGTTGATCGGGAGGAATGCCTTCCTTGTCCTGAATCTTTGCCTTAACGTTT 32224 Query 225643 TCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTCTTGCCCGTCAAAGTTTTTATG 225702 ||||||||||| |||| ||||| || || || || ||||| || || | ||||| | | Sbjct 32225 TCGATGGTGTCGGAGGCCTCCACTTCCAAAGTAATTGTCTTTCCGGTGAGGGTTTTCACG 32284 Query 225703 AACACTTGCATT 225714 || | |||||| Sbjct 32285 AATATCTGCATT 32296 >seq11859 Length=706 Score = 125 bits (138), Expect = 2e-23 Identities = 132/174 (76%), Gaps = 0/174 (0%) Strand=Plus/Minus Query 7552 CAACTTTACAACGTTATTATTACGGCGCATGCCTTTGTTATGATTTTCTTTTTTGTTATG 7611 ||| |||| || |||| |||| || || || || || || ||||| ||| | ||||| Sbjct 629 CAAATTTATAATACTATTGTTACAGCTCACGCTTTCGTAATAATTTTTTTTATAGTTATA 570 Query 7612 CCGGTTATGATAGGCGGTTTCGGAAATTGATTCGTTCCTTTAATGATTGGTGCTCCTGAT 7671 || || || || || ||||| ||||||||||| ||||| |||| ||||| |||| || Sbjct 569 CCTGTAATAATTGGTGGTTTTGGAAATTGATTAGTTCCAATAATAATTGGAGCTCAAGAC 510 Query 7672 ATGGCTTTTCCAAGGCTTAACAATATAAGTTTTTGATTACTACCGCCTTCCTTA 7725 ||||| |||||| | | || |||||||| |||||||| || || ||||| ||| Sbjct 509 ATGGCATTTCCACGTATAAATAATATAAGATTTTGATTGCTTCCACCTTCATTA 456 Score = 114 bits (126), Expect = 3e-20 Identities = 84/98 (86%), Gaps = 0/98 (0%) Strand=Plus/Plus Query 370672 TTCAGGATGACCAAAAAATCAGAATAAATGTTGATAAAGGATAGGATCGCCTCCGCCTGA 370731 ||||||||| ||||||||||| ||||||||||||||||||||||| || || || || || Sbjct 111 TTCAGGATGCCCAAAAAATCAAAATAAATGTTGATAAAGGATAGGGTCCCCCCCTCCAGA 170 Query 370732 TGGATCAAAAAAGCTAGTATTAAAATTTCTATCAGTTA 370769 ||||||||||| |||||||||||| | ||| |||| Sbjct 171 AGGATCAAAAAAAGAAGTATTAAAATTACGATCTGTTA 208 >seq10797 Length=302 Score = 125 bits (138), Expect = 2e-23 Identities = 132/174 (76%), Gaps = 0/174 (0%) Strand=Plus/Minus Query 7552 CAACTTTACAACGTTATTATTACGGCGCATGCCTTTGTTATGATTTTCTTTTTTGTTATG 7611 ||| |||| || |||| |||| |||||||| || || || ||||| ||| | || ||| Sbjct 283 CAAATTTATAATACTATTGTTACAGCGCATGCTTTCGTAATAATTTTTTTTATAGTCATG 224 Query 7612 CCGGTTATGATAGGCGGTTTCGGAAATTGATTCGTTCCTTTAATGATTGGTGCTCCTGAT 7671 || || || || || || || ||||||||||| || || |||| ||||| |||| ||| Sbjct 223 CCTGTAATAATTGGTGGATTTGGAAATTGATTAGTCCCAATAATAATTGGAGCTCAAGAT 164 Query 7672 ATGGCTTTTCCAAGGCTTAACAATATAAGTTTTTGATTACTACCGCCTTCCTTA 7725 || || |||||| | | || || ||||| ||||||||| |||| ||||| ||| Sbjct 163 ATAGCATTTCCACGTATAAATAACATAAGGTTTTGATTATTACCTCCTTCATTA 110 >seq9107 Length=87930 Score = 107 bits (118), Expect = 5e-18 Identities = 100/126 (79%), Gaps = 1/126 (1%) Strand=Plus/Minus Query 7737 GGTAAGATTCTTTGCGTTATATCAAATTAAACCACATACTCCACCGCTTATACAATCTTC 7796 |||||| || || ||||| ||| ||||||||||||| ||||||||||| | | | | Sbjct 55929 GGTAAGGTTTTTCGCGTTGCATCGAATTAAACCACATGCTCCACCGCTTGTGCGGGCCCC 55870 Query 7797 CGTCAGTTTCTTTGAGTTTTAACCTTGCGGTCGTAGTACTCAGGTGGAATATTT-ACGCG 7855 ||||| || |||||||||||||||||||| |||| | | |||| || |||| ||||| Sbjct 55869 CGTCAATTCATTTGAGTTTTAACCTTGCGGCCGTACTCCCCAGGCGGTCGATTTAACGCG 55810 Query 7856 TTAGCT 7861 |||||| Sbjct 55809 TTAGCT 55804 >seq54714 Length=279 Score = 93.3 bits (102), Expect = 1e-13 Identities = 80/99 (81%), Gaps = 0/99 (0%) Strand=Plus/Plus Query 370672 TTCAGGATGACCAAAAAATCAGAATAAATGTTGATAAAGGATAGGATCGCCTCCGCCTGA 370731 ||||||||| ||||||||||| ||||||||||||||||| || || || ||||| || || Sbjct 6 TTCAGGATGCCCAAAAAATCAAAATAAATGTTGATAAAGAATTGGGTCTCCTCCTCCAGA 65 Query 370732 TGGATCAAAAAAGCTAGTATTAAAATTTCTATCAGTTAA 370770 ||||||||||| || || || || | ||| ||||| Sbjct 66 AGGATCAAAAAAAGAGGTGTTGAAGTTACGATCTGTTAA 104 >seq54289 Length=237 Score = 93.3 bits (102), Expect = 1e-13 Identities = 87/111 (78%), Gaps = 0/111 (0%) Strand=Plus/Minus Query 7615 GTTATGATAGGCGGTTTCGGAAATTGATTCGTTCCTTTAATGATTGGTGCTCCTGATATG 7674 || || || || || || ||||||||||| ||||| |||| ||||| |||| ||||| Sbjct 237 GTAATAATTGGTGGGTTTGGAAATTGATTAGTTCCAATAATAATTGGAGCTCAAGATATA 178 Query 7675 GCTTTTCCAAGGCTTAACAATATAAGTTTTTGATTACTACCGCCTTCCTTA 7725 || |||||| | | || |||||||| ||||||||||| || ||||| ||| Sbjct 177 GCATTTCCACGTATAAATAATATAAGGTTTTGATTACTTCCCCCTTCGTTA 127 >seq47028 Length=349 Score = 93.3 bits (102), Expect = 1e-13 Identities = 80/99 (81%), Gaps = 0/99 (0%) Strand=Plus/Plus Query 370672 TTCAGGATGACCAAAAAATCAGAATAAATGTTGATAAAGGATAGGATCGCCTCCGCCTGA 370731 |||||| || ||||||||||| ||||||||||||||||| || || || ||||| || || Sbjct 76 TTCAGGGTGTCCAAAAAATCAAAATAAATGTTGATAAAGAATTGGGTCTCCTCCTCCAGA 135 Query 370732 TGGATCAAAAAAGCTAGTATTAAAATTTCTATCAGTTAA 370770 ||||||||||| || ||||| || | ||| ||||| Sbjct 136 AGGATCAAAAAAAGAGGTGTTAAAGTTACGATCTGTTAA 174 >seq18933 Length=29122 Score = 87.8 bits (96), Expect = 4e-12 Identities = 78/98 (80%), Gaps = 0/98 (0%) Strand=Plus/Minus Query 4471 AATATTTGACCATCAGTAATAGAGATAACATTTGTAGGGATATAAGCAGAAACATCACCT 4530 || ||||||||||| ||||| || || || || || |||| | | ||||||||||||||| Sbjct 13071 AAAATTTGACCATCTGTAATGGAAATTACGTTAGTCGGGACAAACGCAGAAACATCACCT 13012 Query 4531 GCTTGTGTTTCGACAACAGGTAAGGCTGTTAGTGATCC 4568 ||||| || |||| || ||||| || ||||| || || Sbjct 13011 GCTTGCGTCTCGATAATCGGTAAAGCAGTTAGAGAGCC 12974 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1191670287503430