Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Achipteria_20coleoptrata_20[genbank_20GCA_5F000988765.1_202015-05- 06] 56,345 sequences; 88,443,889 total letters Query= NC_031011.1 Length=168993 Score E Sequences producing significant alignments: (Bits) Value seq54669 145 8e-30 seq13760 86.0 7e-12 >seq54669 Length=12211 Score = 145 bits (160), Expect = 8e-30 Identities = 237/339 (70%), Gaps = 2/339 (1%) Strand=Plus/Plus Query 38144 TGGACTGAACAAAGTAATGTAATCGTTCTTTCCGAATCGTTCCATCATCAAATCATTCAG 38203 |||||| || | ||| || | ||||| ||| | || || | ||| || | ||| | Sbjct 11777 TGGACTAAATAGAGTTATCTCTTCGTTTTTTACTAAACGCTGATACATAAATTTATTAAT 11836 Query 38204 TTGAACACCATAATCCATATGACGAATGCGGTTTTCTTCTACGCCTTTGTTATTTTTCAA 38263 ||| || || ||||||||||| |||| || || ||||| || || ||||||||| || Sbjct 11837 TTGTACCCCGTAATCCATATGGCGAACACGATTATCTTCAACACCACGGTTATTTTTTAA 11896 Query 38264 AACGAGAAGATTTTCAACTTCCAAATGCCAAATAGGATAATAAGCAGTAGCAGCGCCGCC 38323 || | |||||||| | || |||||||| | ||| || | || || || || || Sbjct 11897 TACCAACAGATTTTCTATCTCTAAATGCCACAGGGGAAAAAATAACGTTGCTGCACCACC 11956 Query 38324 ACGAATTCCGCCCTGTGAACATGAGTTAACTGCAGCCTGAAAATGTTTCCAAAAAGGAAT 38383 ||| | || || || ||||| || || || |||| |||||| ||||| |||| ||||| Sbjct 11957 ACGCACACCTCCTTGAGAACAAGATTTTACCGCAGTCTGAAAGTGTTTATAAAACGGAAT 12016 Query 38384 AACACCAGGATGGCATACATCACCCATG-CCAATCTCAGAACCTTCGGCACGAATCATAC 38442 | ||| | ||| | | ||| ||||| | ||| || ||||| ||||| || || Sbjct 12017 ACAACCGGTATGAAAAGCTTCA-CCATGACGAATTCCACTACCTTGCGCACGGATGCGAC 12075 Query 38443 CAACGTTAATACCAATTCCAGCGCGTTTAGAGATATATT 38481 || | ||||||||||| || ||||| | || | ||||| Sbjct 12076 CAGCATTAATACCAATCCCCGCGCGCTGCGAAACATATT 12114 >seq13760 Length=57140 Score = 86.0 bits (94), Expect = 7e-12 Identities = 64/75 (85%), Gaps = 0/75 (0%) Strand=Plus/Minus Query 134549 TTTGAGCGGATAATGAGAATCGAACTCACATCATCAGATTGGAAGTCTGAGGTAATACCA 134608 || |||||| |||| ||||||||| ||||||||||| ||||||| |||||||||| ||| Sbjct 18360 TTGGAGCGGGCAATGGGAATCGAACCCACATCATCAGCTTGGAAGGCTGAGGTAATGCCA 18301 Query 134609 TTATACGATATCCGC 134623 |||||| || |||| Sbjct 18300 TTATACCATGCCCGC 18286 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 540268813728600