Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Achipteria_20coleoptrata_20[genbank_20GCA_5F000988765.1_202015-05- 06] 56,345 sequences; 88,443,889 total letters Query= NC_031020.1 Length=163201 Score E Sequences producing significant alignments: (Bits) Value seq54669 136 4e-27 seq6749 118 1e-21 >seq54669 Length=12211 Score = 136 bits (150), Expect = 4e-27 Identities = 318/468 (68%), Gaps = 14/468 (3%) Strand=Plus/Plus Query 139559 GCATCATACATACCTTCAACTTCATGCGGACTGAATAATGTGATATAGTCGTTTTTAATA 139618 || ||||| | ||| ||| ||| ||||| |||| || || | |||||||| | Sbjct 11751 GCTTCATATAAACCCGGAACGTCAGATGGACTAAATAGAGTTATCTCTTCGTTTTTTACT 11810 Query 139619 TAACGTTCGAT-CATTAAGTCATTAATCTGGACACCATAATCTAAATGACGAATACGGTT 139677 |||| | ||| ||| || | |||||| || || || ||||| | ||| |||| ||| || Sbjct 11811 AAACGCT-GATACATAAATTTATTAATTTGTACCCCGTAATCCATATGGCGAACACGATT 11869 Query 139678 TTCATCGATACCTTTATTATTCTTCAGTACGATTAATTTTTCATAT-TCCAGATGCCACA 139736 || || | ||| ||||| || | ||| | | ||||| ||| || | |||||||| Sbjct 11870 ATCTTCAACACCACGGTTATTTTTTAATACCAACAGATTTTC-TATCTCTAAATGCCACA 11928 Query 139737 TCGGATAATATAATGTCGCCGCACCACCACGTACACCACCTTGTGAACATGATTTCACTG 139796 ||| || |||| || || ||||||||||| ||||| ||||| ||||| ||||| || | Sbjct 11929 GGGGAAAAAATAACGTTGCTGCACCACCACGCACACCTCCTTGAGAACAAGATTTTACCG 11988 Query 139797 ATGCCTGATGAGT-TTTCCAGAATGGAATAACACCAGTGTGACGAACTTCGCCCGCGCCA 139855 | |||| ||| ||| | || |||||| ||| || ||| | |||| || | | Sbjct 11989 CAGTCTGA-AAGTGTTTATAAAACGGAATACAACCGGTATGAAAAGCTTCACCATGACGA 12047 Query 139856 ATTTTAGAACCTTCTGCAC-GATACATACCAGCATTAACACCAATACCAGCACGTTTACT 139914 ||| | ||||| |||| ||| | ||||||||||| |||||| || || || | Sbjct 12048 ATTCCACTACCTTGCGCACGGATGC-GACCAGCATTAATACCAATCCCCGCGCGCTGCGA 12106 Query 139915 GATGTACTTAATAATACATTCGTTTGTCTTG---TTAATTGAATCCAGCGAATCACCGCC 139971 | || || || || | || ||| || || || ||||||| || || | Sbjct 12107 AACATATTTTATGAT---TGCGCTTGCTGTGGCATTGATAGAATCCAAACTGTCCCCACA 12163 Query 139972 TTCAATAACAACACAAGAGCTAAACTGACGTGTCGGAGTTCTTACGCC 140019 ||| || | |||||||||||||| || || || || || | ||| || Sbjct 12164 TTCTATCAATACACAAGAGCTAAATTGGCGGGTAGGCGTACGTACACC 12211 >seq6749 Length=158988 Score = 118 bits (130), Expect = 1e-21 Identities = 73/77 (95%), Gaps = 1/77 (1%) Strand=Plus/Minus Query 66403 TGGCACACCCTACAGGATTCGAACCTGTGACCTACGGCTTAGAAGGCCGTTGCTCTATCC 66462 |||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 9028 TGGCGCGCCCTACAGGATTCGAACCTGTGACCTACGGCTTAGAAGGCCGTTGCTCTATCC 8969 Query 66463 AGCTGAGCTAAGAGTGC 66479 ||||||||||||| || Sbjct 8968 -GCTGAGCTAAGAGCGC 8953 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 521747467738200