Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Achipteria_20coleoptrata_20[genbank_20GCA_5F000988765.1_202015-05- 06] 56,345 sequences; 88,443,889 total letters Query= NC_031030.1 Length=170788 Score E Sequences producing significant alignments: (Bits) Value seq54669 167 3e-36 seq13760 95.1 1e-14 >seq54669 Length=12211 Score = 167 bits (184), Expect = 3e-36 Identities = 242/339 (71%), Gaps = 2/339 (1%) Strand=Plus/Plus Query 139421 TGGACTGAACAAAGTAATATAATCGTTCTTTCCGAATCGTTCCATCATCAAATCATTCAG 139480 |||||| || | ||| || | ||||| ||| | || || | ||| || | ||| | Sbjct 11777 TGGACTAAATAGAGTTATCTCTTCGTTTTTTACTAAACGCTGATACATAAATTTATTAAT 11836 Query 139481 TTGAACACCATAATCCATATGACGAATGCGGTTTTCTTCTACGCCTTTGTTATTTTTCAA 139540 ||| || || ||||||||||| |||| || || ||||| || || ||||||||| || Sbjct 11837 TTGTACCCCGTAATCCATATGGCGAACACGATTATCTTCAACACCACGGTTATTTTTTAA 11896 Query 139541 AACGAGAAGATTTTCAACTTCCAAATGCCAAATAGGATAATAAGCAGTAGCAGCGCCGCC 139600 || | |||||||| | || |||||||| | ||| || | || || || || || Sbjct 11897 TACCAACAGATTTTCTATCTCTAAATGCCACAGGGGAAAAAATAACGTTGCTGCACCACC 11956 Query 139601 ACGAATTCCACCCTGTGAACATGATTTAACTGCAGTCTGAAAATGTTTCCAAAAAGGAAT 139660 ||| | || || || ||||| ||||| || ||||||||||| ||||| |||| ||||| Sbjct 11957 ACGCACACCTCCTTGAGAACAAGATTTTACCGCAGTCTGAAAGTGTTTATAAAACGGAAT 12016 Query 139661 AACACCAGTATGACGTACTTCACCCATG-CCAATTTTAGAACCTTCAGCACGAATCATAC 139719 | ||| |||||| ||||| ||||| | |||| | ||||| ||||| || || Sbjct 12017 ACAACCGGTATGAAAAGCTTCA-CCATGACGAATTCCACTACCTTGCGCACGGATGCGAC 12075 Query 139720 CAACATTAATACCAATTCCAGCGCGTTTAGAGATATATT 139758 || ||||||||||||| || ||||| | || | ||||| Sbjct 12076 CAGCATTAATACCAATCCCCGCGCGCTGCGAAACATATT 12114 >seq13760 Length=57140 Score = 95.1 bits (104), Expect = 1e-14 Identities = 66/75 (88%), Gaps = 0/75 (0%) Strand=Plus/Minus Query 69901 TTGGAGCGGATAATGAGAATCGAACTCACATCATCAGATTGGAAGTCTGAGGTAATGCCA 69960 ||||||||| |||| ||||||||| ||||||||||| ||||||| |||||||||||||| Sbjct 18360 TTGGAGCGGGCAATGGGAATCGAACCCACATCATCAGCTTGGAAGGCTGAGGTAATGCCA 18301 Query 69961 TTATACGATATCCGC 69975 |||||| || |||| Sbjct 18300 TTATACCATGCCCGC 18286 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 546008768157600