Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Achipteria_20coleoptrata_20[genbank_20GCA_5F000988765.1_202015-05- 06] 56,345 sequences; 88,443,889 total letters Query= NC_031045.1 Length=157855 Score E Sequences producing significant alignments: (Bits) Value seq54669 109 6e-19 seq11509 87.8 2e-12 >seq54669 Length=12211 Score = 109 bits (120), Expect = 6e-19 Identities = 260/385 (68%), Gaps = 10/385 (3%) Strand=Plus/Plus Query 91538 TTAATCTGAATCCCATAGTCGATACGGCGTTCACGGTTCTCTTCCAATCCACGGTTGTTT 91597 ||||| || | ||| || || ||| |||| |||| || ||||| | |||||||| ||| Sbjct 11832 TTAATTTGTACCCCGTAATCCATATGGCGAACACGATTATCTTCAACACCACGGTTATTT 11891 Query 91598 TTGAGAACAACGACATCATCAAATTGATAATGCCAGATGGGAACATAGCATGTTGCCGAT 91657 || | || | | || || | | ||||||| | ||||| | | | ||||| | Sbjct 11892 TTTAATACCAACAGATTTTCTATCTCTAAATGCCACAGGGGAAAAAATAACGTTGCTGCA 11951 Query 91658 CCACCACGGATACCGCCTTGAGAGCAAGACTTCAGGGCACCAGTC--AAATACTTGATGA 91715 |||||||| | ||| |||||||| ||||| || | ||| ||| ||| || || | Sbjct 11952 CCACCACGCACACCTCCTTGAGAACAAGATTTTACCGCA---GTCTGAAAGTGTTTATAA 12008 Query 91716 AT-GGAACCAGACCTGTATGGACCATTTCCCCTTTACGGATAGGGCTACCGATGC-CACG 91773 | |||| ||| ||||| | ||| || | ||| || ||||| ||| |||| Sbjct 12009 AACGGAATACAACCGGTATGAAAAGCTTCACCATGACGAATTCCACTACCT-TGCGCACG 12067 Query 91774 AATTGCCCCAACATCGAATCCGATGCCAGCACGTTTGGAAACATAATCCACGAT-GCTTT 91832 || ||| ||| | || || || || || | |||||||| | | ||| || | Sbjct 12068 GATGCGACCAGCATTAATACCAATCCCCGCGCGCTGCGAAACATATTTTATGATTGCGCT 12127 Query 91833 TCGCAGTGGCATTAATTGAGTCCAATGTGTCACCAGTTTTGATCAATACACAAGAGCTGA 91892 | || |||||||| || || ||||| |||| ||| || ||||||||||||||||| | Sbjct 12128 T-GCTGTGGCATTGATAGAATCCAAACTGTCCCCACATTCTATCAATACACAAGAGCTAA 12186 Query 91893 ACTGTCGGGTCGGGGTGCGGACGCC 91917 | || ||||| || || || || || Sbjct 12187 ATTGGCGGGTAGGCGTACGTACACC 12211 >seq11509 Length=51200 Score = 87.8 bits (96), Expect = 2e-12 Identities = 68/80 (85%), Gaps = 1/80 (1%) Strand=Plus/Plus Query 19041 GGCCCCGTAGCTCAGT-GGTTAGAGCAGTCGACTCATAATCGATTGGTCGCTGGTTCAAG 19099 |||||| ||||||||| |||||||||| ||||||||||||| | |||||||||||| | Sbjct 31927 GGCCCCTTAGCTCAGTTGGTTAGAGCAAGCGACTCATAATCGCTGGGTCGCTGGTTCGAA 31986 Query 19100 TCCAGCCAGGGTCACCACTA 19119 |||||| ||| ||||| || Sbjct 31987 TCCAGCAGGGGCCACCAATA 32006 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 504652316553000