Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Achipteria_20coleoptrata_20[genbank_20GCA_5F000988765.1_202015-05- 06] 56,345 sequences; 88,443,889 total letters Query= NC_031047.1 Length=170770 Score E Sequences producing significant alignments: (Bits) Value seq54669 116 4e-21 seq13760 86.0 7e-12 >seq54669 Length=12211 Score = 116 bits (128), Expect = 4e-21 Identities = 230/338 (68%), Gaps = 2/338 (1%) Strand=Plus/Minus Query 152118 AATATATCTCCAAACGAGCTGGAATCGGCATTAACGTTGGTATGATTCGTGCCGAAGGTT 152177 ||||| | || | || || || || || ||||| | |||| || ||||| ||||| Sbjct 12114 AATATGTTTCGCAGCGCGCGGGGATTGGTATTAATGCTGGTCGCATCCGTGCGCAAGGTA 12055 Query 152178 CTAAGATTGG-CATGGGTGAAGTACGCCATACTGGTGTTATTCCTTTTTGGAAACATTTT 152236 | ||| | ||||| ||||| ||||| ||| |||||| |||| ||||| ||| Sbjct 12054 GTGGAATTCGTCATGG-TGAAGCTTTTCATACCGGTTGTATTCCGTTTTATAAACACTTT 11996 Query 152237 CAGACTGCTGTTAAATCATGCTCACAGGGTGGAATTCGTGGCGGCGCTGCTACTGCTTAT 152296 |||||||| || ||||| || || || || || | ||||| || || || || | | Sbjct 11995 CAGACTGCGGTAAAATCTTGTTCTCAAGGAGGTGTGCGTGGTGGTGCAGCAACGTTATTT 11936 Query 152297 TATCCTATTTGGCATTTGGAAGTTGAAAATCTTCTCGTTTTGAAAAATAACAAAGGCGTA 152356 | ||| | |||||||| || | |||||||| | || || ||||||||| || || Sbjct 11935 TTTCCCCTGTGGCATTTAGAGATAGAAAATCTGTTGGTATTAAAAAATAACCGTGGTGTT 11876 Query 152357 GAAGAAAACCGCATCCGTCATATGGATTATAGTGTTCAGCTGAATGATTTGATGATGGAA 152416 ||||| || || | || ||||||||||| | || || | ||| | || ||| | Sbjct 11875 GAAGATAATCGTGTTCGCCATATGGATTACGGGGTACAAATTAATAAATTTATGTATCAG 11816 Query 152417 CGATTCGGAAAGAATGATTATATTACTTTGTTCAGTCC 152454 || || | ||| || || | || ||| | || ||||| Sbjct 11815 CGTTTAGTAAAAAACGAAGAGATAACTCTATTTAGTCC 11778 >seq13760 Length=57140 Score = 86.0 bits (94), Expect = 7e-12 Identities = 64/75 (85%), Gaps = 0/75 (0%) Strand=Plus/Minus Query 1124 TTTGAGCGGATAATGAGAATCGAACTCACATCATCAGATTGGAAGTCTGAGGTAATACCA 1183 || |||||| |||| ||||||||| ||||||||||| ||||||| |||||||||| ||| Sbjct 18360 TTGGAGCGGGCAATGGGAATCGAACCCACATCATCAGCTTGGAAGGCTGAGGTAATGCCA 18301 Query 1184 TTATACGATATCCGC 1198 |||||| || |||| Sbjct 18300 TTATACCATGCCCGC 18286 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 545951208726000