Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Achipteria_20coleoptrata_20[genbank_20GCA_5F000988765.1_202015-05- 06] 56,345 sequences; 88,443,889 total letters Query= NC_031048.1 Length=41918 Score E Sequences producing significant alignments: (Bits) Value seq13154 84.2 6e-12 >seq13154 Length=83798 Score = 84.2 bits (92), Expect = 6e-12 Identities = 187/276 (68%), Gaps = 6/276 (2%) Strand=Plus/Plus Query 26929 TTCAGTGGTGTAGCGCTCAACGCCTTGCTGATCAGTCCATTTACGGGTTCGCAGACCGCC 26988 |||||| |||||||| || || | ||||| |||||| || ||| | | || Sbjct 29340 TTCAGTTGTGTAGCGATCCTGACCGTTTTGATCTTGCCATTTGCGTGTTTGTAAGGTCCC 29399 Query 26989 TTCAATGAACACCTT-GCTGCCTTTGCGCAGGTATTCACCAGCGATTTCCGCCAGCTTGC 27047 ||| || | |||| | | ||||| |||| ||||| || | ||| || | || | Sbjct 29400 TTCGATATAAACCTGCGATCCCTTT-CGCAAATATTCTTTTGCCACTTCAGCTATTTTAC 29458 Query 27048 CGAAGATGACAACGCGGTGCCATTCCGTCTGCTCTTTTGGTTCGCCTGTGGCCTTATCTT 27107 |||| | || || || |||||||| |||| ||| ||||||||||| || ||||| Sbjct 29459 CGAACAAAACGACACGATGCCATTCTGTCTTCTCCTTTGGTTCGCCAGTTTGTTTATCGC 29518 Query 27108 TCCACTTTTCGGTTGTGGCAATGCTGAGA--TTGGCAACTGCGCCACCTGACGGCATGTA 27165 ||| |||| || || || | | |||| |||||||| || || || ||||| || Sbjct 29519 GCCAGCTTTCAGTCGTTGCCA--CAGAGATGTTGGCAACAGCCCCCCCGTTTGGCATATA 29576 Query 27166 GCGCACTTCTGGATCGTTGCCTAAATTACCGATTAA 27201 || | ||||||||| | ||||| || || || || Sbjct 29577 ACGAATTTCTGGATCCTGACCTAAGTTCCCAATCAA 29612 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 133926330313200