Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Achipteria_20coleoptrata_20[genbank_20GCA_5F000988765.1_202015-05- 06] 56,345 sequences; 88,443,889 total letters Query= NC_031057.1 Length=180219 Score E Sequences producing significant alignments: (Bits) Value seq54669 224 1e-53 >seq54669 Length=12211 Score = 224 bits (248), Expect = 1e-53 Identities = 319/446 (72%), Gaps = 7/446 (2%) Strand=Plus/Minus Query 43417 GGTGTGCGTACTCCTACGCGTCAGTTTTCCAGTTGCGTAGTGATTGAATCAGGTGATTCA 43476 ||||| ||||| ||||| || || ||| | ||| ||| |||| |||| || || Sbjct 12211 GGTGTACGTACGCCTACCCGCCAATTTAGCTCTTGTGTATTGATAGAATGTGGGGACAGT 12152 Query 43477 CTGGGTTCTCTGAATGCTGTAACCTCTGCGATCGTGAAGTATATTTCACAACGCGCGGGT 43536 ||| |||| | ||||| | | || ||| | || ||| |||| || |||||||| Sbjct 12151 TTGGATTCTATCAATGCCACAGCAAGCGCAATCATAAAATATGTTTCGCAGCGCGCGGGG 12092 Query 43537 ATCGGTGTTAATGCTGGACACATTCG--CGCAATGGGTTCTAAAATCCGTGGTGGTGAAG 43594 || ||| |||||||||| | ||| || ||||| ||| | ||| ||| |||||||| Sbjct 12091 ATTGGTATTAATGCTGGTCGCATCCGTGCGCAA--GGTAGTGGAATTCGTCATGGTGAAG 12034 Query 43595 CAGTACATACAGGCGTGATCCCGTTCTGGAAACATATTCAGACAGCGGTTAAATCCTGTT 43654 | | ||||| || || ||||| | ||||| ||||||| ||||| ||||| |||| Sbjct 12033 CTTTTCATACCGGTTGTATTCCGTTTTATAAACACTTTCAGACTGCGGTAAAATCTTGTT 11974 Query 43655 CACAAGGTGGCGTTCGTGGTGGTGCTGCAACGTTGTATTATCCGATCTGGCATTTGGAAG 43714 | ||||| || || ||||||||||| |||||||| | || ||| | |||||||| || Sbjct 11973 CTCAAGGAGGTGTGCGTGGTGGTGCAGCAACGTTATTTTTTCCCCTGTGGCATTTAGAGA 11914 Query 43715 TTGAAAACCTGCTGGTTCTGAAAAACAACAAAGGTGTTGAGAATAACCGTATTCGTCACC 43774 | ||||| ||| |||| | ||||| ||| |||||||| |||| ||| |||| || Sbjct 11913 TAGAAAATCTGTTGGTATTAAAAAATAACCGTGGTGTTGAAGATAATCGTGTTCGCCATA 11854 Query 43775 TGGATTATGGCGTTCAGCTTAACGATTTGATGTATAAGCGTTTAATCAATAACGATTACA 43834 ||||||| || || || |||| | || |||||| |||||||| | || ||||| | | Sbjct 11853 TGGATTACGGGGTACAAATTAATAAATTTATGTATCAGCGTTTAGTAAAAAACGAAGAGA 11794 Query 43835 TCACACTGTTCAGCC---CTGACGTT 43857 | || || || || | |||||||| Sbjct 11793 TAACTCTATTTAGTCCATCTGACGTT 11768 Score = 89.7 bits (98), Expect = 6e-13 Identities = 136/194 (70%), Gaps = 0/194 (0%) Strand=Plus/Minus Query 45163 CAAAAACATCGCGTATTCGAAACTTTGACTGAAAAACAACTGTCATTCTTCTGGCGACCG 45222 ||||||||| | | || |||| |||| ||||||||| || || || || ||||| ||| Sbjct 10360 CAAAAACATATCATGTTTGAAAAATTGATTGAAAAACAGCTTTCCTTTTTTTGGCGGCCG 10301 Query 45223 GAAGAAGTGGATCTGTCGATCGACCGTATGCAGTATGCAAAAATGCCGGAACACGAGAAA 45282 ||||| | ||| | | || | || | ||||| | || || || || ||| Sbjct 10300 GAAGAGATTGATGTTGCACGTGATAGAATCGACTATGCTGCTTTACCTGAGCATGAAAAA 10241 Query 45283 ATCATTTTTGATTCTAACCTGCAATATCAAACCCTGTTAGATACCATTCAGGGACGTGGC 45342 | |||||| | ||| | |||||||||||||||||||| | || |||||||| || Sbjct 10240 AATATTTTTATTAGTAATTTAAAATATCAAACCCTGTTAGATTCAATCCAGGGACGCAGC 10181 Query 45343 CCTAACCTGGCGTT 45356 |||||| | || || Sbjct 10180 CCTAACATTGCTTT 10167 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 576166712569800