Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Achipteria_20coleoptrata_20[genbank_20GCA_5F000988765.1_202015-05- 06] 56,345 sequences; 88,443,889 total letters Query= NC_031095.1 Length=168758 Score E Sequences producing significant alignments: (Bits) Value seq54669 174 2e-38 >seq54669 Length=12211 Score = 174 bits (192), Expect = 2e-38 Identities = 302/438 (69%), Gaps = 6/438 (1%) Strand=Plus/Minus Query 136412 GGTGTTCGTACTCCAACCCGCCAGTTCAGTTCATGCGTAGTTATTGAAGGTGGTGATAGT 136471 ||||| ||||| || |||||||| || || || || ||| | || ||| |||| || ||| Sbjct 12211 GGTGTACGTACGCCTACCCGCCAATTTAGCTCTTGTGTATTGATAGAATGTGGGGACAGT 12152 Query 136472 CTTAATTCAATTAACGAAGCCGCTGCAT---CAATTACGAAATACATTAGTAAGCGTGCT 136528 | |||| || || | || | ||| |||| | ||||| || |||| || Sbjct 12151 TTGGATTCTATCAATG---CCACAGCAAGCGCAATCATAAAATATGTTTCGCAGCGCGCG 12095 Query 136529 GGTATTGGTATTAATGCGGGGATGATTCGTGCAGAAGGATCAAAAATTGGATTCGGTGAA 136588 || |||||||||||||| || || ||||| |||| |||| | |||||| Sbjct 12094 GGGATTGGTATTAATGCTGGTCGCATCCGTGCGCAAGGTAGTGGAATTCGTCATGGTGAA 12035 Query 136589 GTCAAGCATACTGGTGTTATTCCTTTCTGGAAACACTTCCAAACCGCAGTTAAGTCATGC 136648 | ||||| ||| |||||| || | |||||||| || || || || || || || Sbjct 12034 GCTTTTCATACCGGTTGTATTCCGTTTTATAAACACTTTCAGACTGCGGTAAAATCTTGT 11975 Query 136649 TCCCAAGGCGGAGTCCGTGGTGGTGCAGCTACACTGTATTATCCGATGTGGCACTTGGAA 136708 || ||||| || || |||||||||||||| || | | || ||| ||||||| || || Sbjct 11974 TCTCAAGGAGGTGTGCGTGGTGGTGCAGCAACGTTATTTTTTCCCCTGTGGCATTTAGAG 11915 Query 136709 GTTGAAAACCTCCTCGTACTTAAGAACAACAAAGGTGTAGATGAAAACCGTATTCGCCAT 136768 | ||||| || | ||| | || || ||| ||||| || || || ||| |||||||| Sbjct 11914 ATAGAAAATCTGTTGGTATTAAAAAATAACCGTGGTGTTGAAGATAATCGTGTTCGCCAT 11855 Query 136769 TTAGATTATGGTGTTCAGATTAATAACCTGATGATTGAACGTTTGATTAAGAATGATTAC 136828 | ||||| || || || |||||||| | ||| | | ||||| | || || || | Sbjct 11854 ATGGATTACGGGGTACAAATTAATAAATTTATGTATCAGCGTTTAGTAAAAAACGAAGAG 11795 Query 136829 ATCACTCTGTTTAGTCCA 136846 || ||||| ||||||||| Sbjct 11794 ATAACTCTATTTAGTCCA 11777 Score = 87.8 bits (96), Expect = 2e-12 Identities = 90/117 (77%), Gaps = 3/117 (3%) Strand=Plus/Minus Query 138694 AACGCATTAGAAGCTATTCGTTTCTATGTTAGTTTTGCATGTACCTTCAACTTCCATAAA 138753 || |||||||||||| |||| || ||||| |||||||| ||| | || || | || Sbjct 9850 AATGCATTAGAAGCTGTTCGCTTTTATGTGAGTTTTGCCTGTTCGTTTGCTTTTGCTGAA 9791 Query 138754 AATATGGAAATCATGGAAGGTAATGCTAAAATCATGAAGTTCATTGCTCGTGATGAA 138810 | ||| | |||||||||||||||||||| || ||||| || |||||||||||| Sbjct 9790 CGT---GAATTAATGGAAGGTAATGCTAAAATTATCAAGTTGATCGCTCGTGATGAA 9737 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 539517343371600