Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Achipteria_20coleoptrata_20[genbank_20GCA_5F000988765.1_202015-05- 06] 56,345 sequences; 88,443,889 total letters Query= NC_031103.1 Length=165772 Score E Sequences producing significant alignments: (Bits) Value seq54669 159 4e-34 seq13760 91.5 2e-13 >seq54669 Length=12211 Score = 159 bits (176), Expect = 4e-34 Identities = 238/338 (70%), Gaps = 0/338 (0%) Strand=Plus/Plus Query 138355 TGGACTGAACAAAGTAATGTAGTCGTTCTTTCCAAAACGTTCCATCATTAGGTCATTCAG 138414 |||||| || | ||| || | ||||| ||| | ||||| | ||| | | ||| | Sbjct 11777 TGGACTAAATAGAGTTATCTCTTCGTTTTTTACTAAACGCTGATACATAAATTTATTAAT 11836 Query 138415 TTGAACGCCATAATCCATATGACGAATACGGTTTTCTTCTACGCCTTTGTTATTTTTCAA 138474 ||| || || ||||||||||| |||| ||| || ||||| || || ||||||||| || Sbjct 11837 TTGTACCCCGTAATCCATATGGCGAACACGATTATCTTCAACACCACGGTTATTTTTTAA 11896 Query 138475 AACGAGAAGATTTTCAACTTCCAAATGCCAAATAGGATAATAAGCAGTAGCAGCGCCGCC 138534 || | |||||||| | || |||||||| | ||| || | || || || || || Sbjct 11897 TACCAACAGATTTTCTATCTCTAAATGCCACAGGGGAAAAAATAACGTTGCTGCACCACC 11956 Query 138535 ACGAATTCCACCCTGTGAGCATGATTTAACAGCAGTCTGAAAATGTTTCCAAAAAGGAAT 138594 ||| | || || || || || ||||| || ||||||||||| ||||| |||| ||||| Sbjct 11957 ACGCACACCTCCTTGAGAACAAGATTTTACCGCAGTCTGAAAGTGTTTATAAAACGGAAT 12016 Query 138595 AACACCAGTATGACGTACTTCACCTGTACCAATCTTAGAACCTTCGGCACGAATCATACC 138654 | ||| |||||| ||||||| || ||| | ||||| ||||| || ||| Sbjct 12017 ACAACCGGTATGAAAAGCTTCACCATGACGAATTCCACTACCTTGCGCACGGATGCGACC 12076 Query 138655 AACGTTAATACCAATTCCAGCGCGTTTGGAGATATATT 138692 | | ||||||||||| || ||||| | || | ||||| Sbjct 12077 AGCATTAATACCAATCCCCGCGCGCTGCGAAACATATT 12114 >seq13760 Length=57140 Score = 91.5 bits (100), Expect = 2e-13 Identities = 65/75 (87%), Gaps = 0/75 (0%) Strand=Plus/Minus Query 70401 TTGGAGCGGATAATGAGAATCGAACTCACATCATCAGATTGGAAGTCTGAGGTAATACCA 70460 ||||||||| |||| ||||||||| ||||||||||| ||||||| |||||||||| ||| Sbjct 18360 TTGGAGCGGGCAATGGGAATCGAACCCACATCATCAGCTTGGAAGGCTGAGGTAATGCCA 18301 Query 70461 TTATACGATATCCGC 70475 |||||| || |||| Sbjct 18300 TTATACCATGCCCGC 18286 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 529968873218400