Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Achipteria_20coleoptrata_20[genbank_20GCA_5F000988765.1_202015-05- 06] 56,345 sequences; 88,443,889 total letters Query= NC_031129.1 Length=103445 Score E Sequences producing significant alignments: (Bits) Value seq9107 423 1e-113 seq33314 206 2e-48 seq13154 170 1e-37 seq11509 82.4 5e-11 >seq9107 Length=87930 Score = 423 bits (468), Expect = 1e-113 Identities = 887/1314 (68%), Gaps = 16/1314 (1%) Strand=Plus/Plus Query 96687 AGTCAGCACCAGCATAGTTATCAAACCGTGAGTATTGGCCGTTAAAAGCCAATCTCACCG 96746 ||| || || ||||| || || || || || |||| | |||||| | ||||| ||||| Sbjct 48787 AGTTAGGACTGGCATAATTGTCGAATCGAGACCATTGACTGTTAAAGGTCAATCGCACCG 48846 Query 96747 TGCCAATTGGGCCATTTCGTTGCTTTCCGATAATTACCTCGGCAATGCCCTTCATTTCGC 96806 ||||||| || ||||| ||||| || || | ||| | || || ||||| || | |||| Sbjct 48847 TGCCAATCGGACCATTACGTTGTTTACCTAAAATAATTTCTGCGATGCCTTTTTTATCGC 48906 Query 96807 TATCCGGGTGATAAACTTCGTCGCGATACAAAAACATGATCAGGTCTGCGTCCTGCTCAA 96866 |||| || || |||||||| | ||| | |||||| || || || || || || |||| Sbjct 48907 TATCTTCATGGTACACTTCGTCTCTATAAATAAACATAATAAGATCAGCATCTTGTTCAA 48966 Query 96867 TTGCTCCTGATTCACGTAAATCTGAATTTACCGGTCGTTTGTCCGCACGCTGTTCAAGCG 96926 | | || ||||| |||||||| ||||| | || || ||||| ||||| ||||| || Sbjct 48967 TAGAGCCGGATTCTCGTAAATCGGAATTAATTGGACGCTTGTCTGCACGTTGTTCCAGGC 49026 Query 96927 ATCGATTAAGTTGTGACAATGCCACCACCGGTACTTGTAATTCCTTCGCCAACGCCTTCA 96986 |||||||| || || | || || || ||||||| || ||| ||||||| || || | Sbjct 49027 CGCGATTAAGCTGGGAAATGGCTACTACTGGTACTTCTAGTTCTTTCGCCAGTGCTTTTA 49086 Query 96987 GTGAGCGAGAAATCTCGGCAATTTCCAGCGTTCGGTTATCTTGCAGCTCCGGGACGCGCA 97046 ||| |||||||| || | ||||| || ||||||||||| | |||| || || | Sbjct 49087 ATGATCGAGAAATTTCACCGATTTCTAGTGTTCGGTTATCCATTAATGCCGGAACCCGTA 49146 Query 97047 TAAGTTGCAGGTAGTCGATCATAATCATGCTCAAACCACCATTTTCTTTATAAACACGAC 97106 | ||||| | || || |||| ||||| || || ||||| ||||| | |||| || | Sbjct 49147 TGAGTTGTAAATAATCTATCAAAATCAAACTTAAGCCACCGTTTTCACGAAAAACTCGTC 49206 Query 97107 GAGCGCGGGAACGTAGCTCTGTCGGCGTCAGGGCGCTTGAGTCATCAATAAAAATATTCT 97166 |||| ||||| || | ||| | || |||| | | ||| || |||||| | ||||| Sbjct 49207 GAGCACGGGAGCGCACATCTATTGGTGTCAACGTGGATGAATCGTCAATATACATATTGC 49266 Query 97167 GCTTGTCCAACAGAATACCCATTGCGCCAGAAACCCGCGCCCAATCCTCGTCGTTAAGTT 97226 | | || | || || ||||| | | |||| || ||||| || || ||| | || Sbjct 49267 GTCTTTCAAGTAGTATCCCCATCGAACTGGAAATACGTGCCCAGTCTTCATCGCCTAATT 49326 Query 97227 GCCCTGTTCGAATACGAGTCTGATCAACGCGTGCAAGAGAAGCCAGTGAGCGCATCATCA 97286 | || || || ||||| || ||||| | |||| || || ||||| |||||||||| Sbjct 49327 GGCCAGTACGGATACGCGTTTGATCTATTCGTGATAGCGATGCCAGCATTCGCATCATCA 49386 Query 97287 GCTGGTGGCTCGGCATCTCAAGGCTAAAAACCAATACGGGCTTATCGTTACGAACTGCGG 97346 |||| || ||||| || | || || | || || || || || | | |||| Sbjct 49387 GCTGATGAGCAGGCATTTCTAAACTGAATATTAACACAGGTTTTTCCTGCATCATGGCGG 49446 Query 97347 CATTTTCGACGAGATTCATCGCAAACGTGGTCTTCCCCATAGATGGGCGGGCGGCGACAA 97406 |||||||| |||||||| ||||| || || || ||||| || || || || ||||||| Sbjct 49447 CATTTTCGCATAGATTCATAGCAAAAGTAGTTTTACCCATGGAAGGACGAGCAGCGACAA 49506 Query 97407 TGATGAGATCGGACGACTGAAGCCCTGCCGTCTTCTTATTGAGATCGGTAAATCCGGTAT 97466 |||| | ||| || || | || || || || |||| | || | | |||||| Sbjct 49507 TGATCAAATCCGATTTTTGCAAACCCGCTGTTTTTTTATCTAAGTCCTGATAACCGGTAG 49566 Query 97467 CAAGTCCCGTTACACCATCATGCGGTCG-CTGAAACAACTCTTCTATGCGAGATACCGTT 97525 | || ||||| | | || || || ||| || | ||||| ||||| | | || Sbjct 49567 ATACCCCGGTTACCTCTTTATCTGGCCGTCTGTAA-AGTTCTTCAATGCGCGTCATGGTG 49625 Query 97526 GCATCGAGAATGCTGGCGATATCTTTTGGACCACTACCGCTCTTTT--GTCGTTTTTCAG 97583 | || | ||| | ||| |||||| | ||| |||| | || || |||| | Sbjct 49626 TCTTCTAAGATGTATTCAATACTTTTTGG--CCCTATCGCTTTATTAGTTCTACTTTCTG 49683 Query 97584 CTATTTCAAAAACGCGGCGTTCGGCCATATCCAGCAATTCATTGCTGCCCCGGCCATCCT 97643 |||||| ||| || | |||||||| || | || || | ||| | || | ||| Sbjct 49684 CTATTTGAAATACCAGTGATTCGGCCAAGTCTAATAAATCTTCGCTACTGCGTC---CCT 49740 Query 97644 GCGCA---TATCCAGCTTCAGCTATTTCATTTGCGACGGAAATCATTTCACGAACAACCG 97700 | | | || ||||| ||||| |||| || || || || |||||||| | || || | Sbjct 49741 GTGGATTGTAACCAGCATCAGCAATTTTGTTAGCAACCGAGATCATTTCCCTGACCACTG 49800 Query 97701 CGCGTTCACGAACGATATCCGCATAAGCACAAATATTTGCCGCGCTGGGCGTGTTCTTTG 97760 | |||||||| || ||||| ||||||||| ||| ||||| ||||| || ||||| || | Sbjct 49801 CTCGTTCACGGACTATATCTGCATAAGCATTAATGTTTGCAGCGCTAGGGGTGTTTTTAG 49860 Query 97761 ACATCTCCGCAAGGTACGCAAAACCACCGGCGCGTTCTAATTTACCGTTCTGTTCAAGTG 97820 | | ||| || | || ||||| || || | ||||| || |||||||| |||| Sbjct 49861 ATAGCTCAGCTAAATATGCAAATCCCCCTACCGAATCTAAGAGCCCTTTCTGTTCTAGTG 49920 Query 97821 CTTCAGCAAGTGTTATCAAATCAATCGGTTTGCCATGACTT--AATAACCTCTCCATCTC 97878 ||| | | || || | |||||| ||||| | ||| ||| | || |||||| Sbjct 49921 ATTCTGATAAGGTAATAAGATCAATAGGTTT--ATTTGCTTCCGATAGACACTGCATCTC 49978 Query 97879 ACTGAAAATTTCACGATGAGCATTGGTATAAAAATCATCAGCAACTATACGATCTGCCAC 97938 | | ||||| ||||| | | || ||||||||| | || || || || Sbjct 49979 AATAAAAATCCGGCGATGGGGGCGGCTAAAAAAATCATGACTCGTTACGCGTTCAAAGAC 50038 Query 97939 TTCATCCCAGCGGCAGTTATCAAGCATTAAGCCACCAAGTACAGCTTGTTCTGC 97992 |||||| || ||||| | ||| || ||||| | ||||| |||||||| Sbjct 50039 GCTATCCCAACGCTCATTATCTAACATCAATCCACCCAATACAGACTGTTCTGC 50092 >seq33314 Length=561 Score = 206 bits (228), Expect = 2e-48 Identities = 387/562 (69%), Gaps = 10/562 (2%) Strand=Plus/Minus Query 58835 CCTTTGTTCAGGCCGGCATGCACGCGGCGGCGCAGTTCAACACTTTGCAGCCAGTCCAGG 58894 ||||| ||||| || || || || || || || ||| | | | | |||||| || Sbjct 560 CCTTTATTCAGCCCCGCCTGTACTCGCCGACGAAGTGCCGGATCGCGGAACCAGTCGAGC 501 Query 58895 ATGAACAGCGTGCGCTCGATCCGGCCCAGCTCGCGCAGGGCCACGGCCAGTCCGTTCTGG 58954 || |||||||| || || || ||||| | || | ||| || ||| |||||||| || Sbjct 500 ATAAACAGCGTTCGTTCAATACGGCCAATTTCCCTCAGTGCTTTGGCAAGTCCGTTTTGC 441 Query 58955 CGCGGGTAGCTGCCGAGCTTGCGCAGCATCAGCGAGGCGGTGACGGTGCCCTGCTTGATC 59014 ||||||||| | ||||| ||||||||| || || || || || |||||||| ||| Sbjct 440 TTGGGGTAGCTGGCAAGCTTTTTCAGCATCAGGGATGCCGTCACTGTTCCCTGCTTTATC 381 Query 59015 GAGCTGGCCAGGCGCAGGATGTCGTCCCAGTGGGCACGCACGTGCTTGATGTTCAGGGTG 59074 ||| | ||||| ||||| | ||| |||||| | | || | |||||| || Sbjct 380 GAGGTCGCCAGACGCAGCACTTCGCGCCAGTGAATTTCAATTTCTTTCAGATTCAGGCTG 321 Query 59075 C-CGCCGAT--CAGCGGGCGCAACGTCGGGTA--GGCTTGCACGCCCTGCGGCACGTACA 59129 || ||| ||| | | | || |||||| || || |||| | | ||| Sbjct 320 GTCGTTGATATCAGTGACTGAAGCGCCGGGTATTGGTCCGCTTTCCCTTTGATAA--ACA 263 Query 59130 GCTTGGTTTCGCCGAGGTCGCGGATGCGCGGCGCGAAGCGGAAGCCTAGCAGGTGCATCA 59189 |||| | ||| ||| || | ||| ||||| ||| || || ||||| ||||||| Sbjct 262 GCTTCTTGTCGTGGAGATCCCTGATTCGCGGACAGAACGCAAATCCCAGCAGATGCATCA 203 Query 59190 GGGCAAAGACGTGATCGGTGAAGCCGGCCGTGTCGGTGTAGTGCTCCTCGATCCGCAGGT 59249 |||||||||| ||||||||||| || || || |||||||| || ||| ||| ||| | Sbjct 202 GGGCAAAGACATGATCGGTGAAACCCGCTGTATCGGTGTAATGTTCCCTGATTTCCAGAT 143 Query 59250 CGGACTCGTGGTACAGCAGGCCGTCGAGCACATAGGTGGAATCGCGGACGCCGACATTCA 59309 || ||||||||||||| ||| |||| ||||| ||| ||||| | ||| ||| | | | Sbjct 142 CGCTTTCGTGGTACAGCAAGCCATCGAACACATGGGTTGAATCCCTGAC-CCGGC--TGA 86 Query 59310 CCACGCGGGTGCTGAACGGCGCGTACTGGTCGGAGATATGGGTATAGAACAGCCGTCCCG 59369 | || |||| ||||| ||| || || || ||||||||||| ||| | ||||| | Sbjct 85 TGATGCAGGTGTAAAACGGGCTGTATTGATCCGAAATATGGGTATAAAACTGACGTCCAG 26 Query 59370 GCTCGCTACCGTACTTCGGGTT 59391 |||| || || |||||||| Sbjct 25 GCTCCTGCCCATATTTCGGGTT 4 >seq13154 Length=83798 Score = 170 bits (188), Expect = 1e-37 Identities = 242/334 (72%), Gaps = 6/334 (2%) Strand=Plus/Plus Query 44701 GGCGAGCGCCGATCATTTGCATGGTGCCGCCCTGGCTGACGATAATTTCCGTCGTGTAAC 44760 ||||| | || | ||||||||||||||| || | |||||| | ||| || ||||| | Sbjct 29294 GGCGACCCCCTAGCATTTGCATGGTGCCTCCTAGATTGACGACCACTTCAGTTGTGTAGC 29353 Query 44761 GTTCTACACCGGCGTCATCTGTCCACTTACGGGTTT-TAAGTTTCCCTTCGATGTAGACC 44819 | || |||| | |||| ||| || || |||| |||| |||||||||| || ||| Sbjct 29354 GATCCTGACCGTTTTGATCTTGCCATTTGCGTGTTTGTAAG-GTCCCTTCGATATAAACC 29412 Query 44820 TGAGAACCTTTTCGTAAATACTCACTCGCAATTTCAGCAAGTTTTCCGAACAAAACGACT 44879 || || || ||||| ||||| || | || | |||||| | ||| |||||||||||||| Sbjct 29413 TGCGATCCCTTTCGCAAATATTCTTTTGCCACTTCAGCTATTTTACCGAACAAAACGACA 29472 Query 44880 TTATGCCATTCTGTTTGCTCTTTCTGTTGGCCCGTTTGCTTGTCGCGCCATGATTCATTC 44939 |||||||||||| | ||| || ||| ||| ||||| || |||||||| |||| || Sbjct 29473 CGATGCCATTCTGTCTTCTCCTTTGGTTCGCCAGTTTGTTTATCGCGCCAGCTTTCAGTC 29532 Query 44940 GTTGCGATGCTGAG-TCTT-CCGACCGCTCCGCCATTTGGTATATACCTGATCTCCGGGT 44997 ||||| | | ||| | || | || || || || ||||| ||||| | || || || | Sbjct 29533 GTTGCCA--CAGAGATGTTGGCAACAGCCCCCCCGTTTGGCATATAACGAATTTCTGGAT 29590 Query 44998 CTTGCCCCAGGGTACCAATCAGGATGACTTTGTT 45031 | || || | | | ||||||| | |||||| || Sbjct 29591 CCTGACCTAAGTTCCCAATCAAAAGGACTTTATT 29624 >seq11509 Length=51200 Score = 82.4 bits (90), Expect = 5e-11 Identities = 69/82 (84%), Gaps = 2/82 (2%) Strand=Plus/Minus Query 98312 AATAT-GGTGGCCCCTACCGGACTTGAACCGGTGACCGTGCGATTATGAGTCGCCAGCTC 98370 ||||| |||||||||| | ||| | ||||| | |||| ||||||||||||||| |||| Sbjct 32008 AATATTGGTGGCCCCTGCTGGATTCGAACCAGCGACCCAGCGATTATGAGTCGCTTGCTC 31949 Query 98371 TAACC-ACTGAGCTAAAGGGCC 98391 ||||| |||||||||| ||||| Sbjct 31948 TAACCAACTGAGCTAAGGGGCC 31927 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 330671969968270