Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Achipteria_20coleoptrata_20[genbank_20GCA_5F000988765.1_202015-05- 06] 56,345 sequences; 88,443,889 total letters Query= NC_031224.1 Length=59443 Score E Sequences producing significant alignments: (Bits) Value seq4070 122 3e-23 >seq4070 Length=28035 Score = 122 bits (134), Expect = 3e-23 Identities = 284/418 (68%), Gaps = 14/418 (3%) Strand=Plus/Minus Query 51924 ATTTGGGACGAATGGGCGGATGAAAATGGTAACCTGGGTCCTGTGTATGGTAAGCAGTGG 51983 |||||| | |||||||| ||| |||| | || || || | ||||| || || ||| Sbjct 7654 ATTTGGAATGAATGGGCAGATAGCGATGGCGAGCTTGGCCCCATATATGGCAAACAATGG 7595 Query 51984 CGTAGTTGGGATGCTGGTG----GCGGCAAGGTCATCGA-TCAGATCCATGAAGTCGTCA 52038 || |||||| || || |||| || | ||| | |||| | ||| | | | || Sbjct 7594 CGCGCTTGGGAAGCAACTGACGGGCGGAAAATTGATCAACTCAG--CAATGTATT-GACA 7538 Query 52039 -AATCAATTAAGAACGATCCTGATAGTCGACGGCACATTGTCTCTGCTTGGAATGTGGGT 52097 ||| || || | || ||| ||| || ||| | |||| |||||||||||||| || Sbjct 7537 GAATTAA--AACAGCG-TCCAGATTCACGCCGGATCGTTGTTTCTGCTTGGAATGTAGGA 7481 Query 52098 GATTTGGATGATATGGCGTTGGCTCCCTGCCATACACTATTCCAATTCTATGTAGCTGAA 52157 || | ||| | ||||| | || |||||||| | | || ||||||||||| || | Sbjct 7480 GAAATAGATAACATGGCTCTTGCCCCCTGCCACGCGTTTTTTCAATTCTATGTTGCCAAC 7421 Query 52158 GGTAAGCTTTCGTGCCATTTGTATCAGCGGTCTGCCGACATGTTCTTGGGCGTTCCGTTT 52217 | || ||||| ||||| | || ||||| || ||| | || | ||| | |||||| Sbjct 7420 GACAAACTTTCCTGCCAACTTTACCAGCGTTCCTGCGATGTATTTCTTGGCCTACCGTTT 7361 Query 52218 AACATTGCCAGCTATTCCTTGCTGACGCATCTGATTGCTCGAGCAGT-TGGCCTTGATGT 52276 || ||||| ||||| || | | || || |||| |||| |||||| | ||| | || Sbjct 7360 AATATTGCAAGCTACGCCCTATTAACACAGATGATCGCTC-AGCAGTGCGACCTAAAAGT 7302 Query 52277 TGGTGAATTCATTTGGACTGGTGGCGACGTCCATATCTACAACAACCATGTAGATCAG 52334 ||||| || |||||||| || || || |||| ||||| || ||| |||| ||| Sbjct 7301 AGGTGATTTTATTTGGACAGGAGGGGATATCCACATCTATTGTAATCATATAGAACAG 7244 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 189968807360450