Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Achipteria_20coleoptrata_20[genbank_20GCA_5F000988765.1_202015-05- 06] 56,345 sequences; 88,443,889 total letters Query= NC_031465.1 Length=360610 Score E Sequences producing significant alignments: (Bits) Value seq214 129 1e-24 seq17432 125 2e-23 seq669 123 6e-23 >seq214 Length=17119 Score = 129 bits (142), Expect = 1e-24 Identities = 165/225 (73%), Gaps = 2/225 (1%) Strand=Plus/Plus Query 151884 CTGAGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAA-AGT 151942 || ||||| || || | |||||| || ||||| ||||||||||||||||| ||||| ||| Sbjct 962 CTCAGTCTCAGCACCAAATGAAGGGTCGACTCCTTTTGGATGTTGTAATC-GCTAAGAGT 1020 Query 151943 TCTCCCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCC 152002 ||| || ||||||| ||| || || ||||| | || |||||| |||| | || || Sbjct 1021 TCTGCCGTCTTCTAATTGTTTGCCAGCAAAGATCAACCGCTGCTGATCCGGAGGTATGCC 1080 Query 152003 TTCCTTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAG 152062 ||||| || ||||| ||| || ||| |||| | | || ||| || ||||| Sbjct 1081 CTCCTTGTCCTGAATCTTTGCCTTTACATTCTCAATAGTATCGCTGGGCTCCACCTCAAG 1140 Query 152063 AGTAATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCATTTT 152107 ||| || || || ||||| | ||||| ||||||| |||||||| Sbjct 1141 AGTGATGGTCTTACCCGTCAACGTCTTGACGAAGATTTGCATTTT 1185 >seq17432 Length=31749 Score = 125 bits (138), Expect = 2e-23 Identities = 156/214 (73%), Gaps = 0/214 (0%) Strand=Plus/Minus Query 151892 GAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATC 151951 ||| || | |||||| || ||||| ||||| ||||| ||||||| | ||| | ||| || Sbjct 24578 GAGTACCAAATGAAGGGTCGACTCCTTTTGAATGTTATAATCGGAAAGAGTGCGCCCGTC 24519 Query 151952 TTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTC 152011 ||| | ||| ||||||||||| || || || ||||| | | ||| ||||| || || Sbjct 24518 TTCCAACTGTTTGCCGGCGAAGATCAGTCTTTGTTGGTCGGGAGGGATGCCTTCTTTATC 24459 Query 152012 TTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGT 152071 ||| ||||| || || |||| | | |||| || ||| || ||||| || || || Sbjct 24458 TTGGATTTTGGCCTTAACGTTCTCAATGGTGTCGGAGGGCTCCACCTCAAGGGTTATGGT 24399 Query 152072 TTTGCCCGTGAGAGTCTTCACGAAGACCTGCATT 152105 ||| || || |||||||| || |||| |||||| Sbjct 24398 TTTTCCGGTCAGAGTCTTAACAAAGATTTGCATT 24365 Score = 120 bits (132), Expect = 7e-22 Identities = 161/224 (72%), Gaps = 0/224 (0%) Strand=Plus/Minus Query 151884 CTGAGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTT 151943 || || | ||| || | |||||| || ||||| ||||| ||||||||||||| | ||| Sbjct 23966 CTCAGACGGAGTACCAAATGAAGGGTTGACTCCTTTTGAATGTTGTAATCGGAGAGAGTG 23907 Query 151944 CTCCCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCT 152003 | || |||||||| ||| || || ||||| || ||||| ||||| | | ||| || Sbjct 23906 CGGCCGTCTTCTAGTTGTTTGCCCGCAAAGATCAGTCTCTGTTGGTCGGGAGGGATGCCC 23847 Query 152004 TCCTTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGA 152063 || || || ||||| || || || |||| | | |||| || ||| || ||||| Sbjct 23846 TCTTTGTCCTGAATCTTGGCCTTCACGTTCTCAATGGTGTCGGAGGGCTCCACCTCAAGG 23787 Query 152064 GTAATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCATTTT 152107 ||||| ||||| || || | || |||||||| | |||||||| Sbjct 23786 GTAATGGTTTTTCCGGTCAACGTTTTCACGAAAATTTGCATTTT 23743 Score = 113 bits (124), Expect = 1e-19 Identities = 158/222 (71%), Gaps = 0/222 (0%) Strand=Plus/Minus Query 151884 CTGAGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTT 151943 ||||||| || || | |||||| || ||||| ||||| || ||||| |||| | ||| Sbjct 25042 CTGAGTCGAAGCACCAAATGAAGGGTCGACTCCTTTTGAATATTGTAGTCGGAAAGAGTG 24983 Query 151944 CTCCCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCT 152003 | ||| ||||| || ||| || |||||||| | | ||||| |||| | || ||| Sbjct 24982 CGCCCGTCTTCCAGTTGTTTGCCAGCGAAGATCAATCGTTGCTGATCCGGAGGAATCCCT 24923 Query 152004 TCCTTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGA 152063 || || |||||||| || || ||| |||| | | |||| || ||| ||||| | | Sbjct 24922 TCTTTGTCTTGAATCTTAGCCTTTACATTCTCGATGGTGTCCGACGGCTCCACTTCCAAA 24863 Query 152064 GTAATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCATT 152105 || || || || || || | ||||||||||| | |||||| Sbjct 24862 GTGATGGTCTTTCCGGTCAATGTCTTCACGAATATTTGCATT 24821 Score = 98.7 bits (108), Expect = 2e-15 Identities = 155/222 (70%), Gaps = 0/222 (0%) Strand=Plus/Minus Query 151884 CTGAGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTT 151943 || || | ||| || | ||||||||| ||||| ||||| || || || || | | ||| Sbjct 24814 CTCAGACGGAGTACCAAATGAAGAGTCGACTCCTTTTGAATATTATAGTCAGAGAGTGTT 24755 Query 151944 CTCCCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCT 152003 | || |||||||| ||| |||||||||||||| | ||| || |||| | || || Sbjct 24754 CGGCCGTCTTCTAGTTGTTTGCCGGCGAAGATAAGACGCTGTTGATCCGGAGGAATACCC 24695 Query 152004 TCCTTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGA 152063 || || || |||||||| || || |||| | | |||| || ||| ||||| | | Sbjct 24694 TCTTTGTCCTGAATTTTCGCCTTCACGTTCTCAATGGTGTCCGACGGCTCCACTTCCAAA 24635 Query 152064 GTAATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCATT 152105 || || || || || || | || || ||||| | |||||| Sbjct 24634 GTGATGGTCTTTCCGGTCAATGTTTTGACGAATATTTGCATT 24593 >seq669 Length=42814 Score = 123 bits (136), Expect = 6e-23 Identities = 155/213 (73%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 151893 AGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCT 151952 ||||| | |||||| || ||||||||||||||||||||||| | | ||| | || || Sbjct 31858 AGGACTAAATGAAGGGTTGACTCTTTTTGGATGTTGTAATCAGAGAGAGTGCGGCCGTCC 31917 Query 151953 TCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCT 152012 |||| ||| || || |||||||| ||||| || |||| | || |||||||| || Sbjct 31918 TCTAACTGTTTGCCCGCAAAGATAAGTCTCTGTTGATCCGGAGGAATGCCTTCCTTGTCC 31977 Query 152013 TGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTT 152072 ||||| ||| || || | || | | | || || ||| ||||| | |||||| || Sbjct 31978 TGAATCTTTGCCTTAACGTTTTCGATGGTATCGGAGGCCTCCACTTCCAAAGTAATTGTC 32037 Query 152073 TTGCCCGTGAGAGTCTTCACGAAGACCTGCATT 152105 || || ||||| || |||||||| | |||||| Sbjct 32038 TTTCCGGTGAGGGTTTTCACGAATATTTGCATT 32070 Score = 118 bits (130), Expect = 2e-21 Identities = 154/213 (72%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 151893 AGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCT 151952 || || | ||| ||||| ||||| || || ||||||||||| | | ||| | || || Sbjct 31630 AGAACCAAATGGAGAGTCGACTCCTTCTGAATGTTGTAATCAGAGAGAGTGCGGCCGTCC 31689 Query 151953 TCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCT 152012 |||| ||| || || |||||||| ||||| || |||| | || |||||||| || Sbjct 31690 TCTAACTGTTTGCCCGCAAAGATAAGTCTCTGTTGATCCGGAGGAATACCTTCCTTGTCC 31749 Query 152013 TGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTT 152072 ||||| ||| || || | || | | | || ||| ||| ||||| | |||||| || Sbjct 31750 TGAATCTTTGCCTTCACGTTTTCGATGGTATCCGAAGCCTCCACTTCCAAAGTAATGGTC 31809 Query 152073 TTGCCCGTGAGAGTCTTCACGAAGACCTGCATT 152105 || || ||||| ||||||||||| | ||||||| Sbjct 31810 TTTCCGGTGAGGGTCTTCACGAATATCTGCATT 31842 Score = 104 bits (114), Expect = 5e-17 Identities = 152/215 (71%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 151893 AGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCT 151952 || || | |||||| || ||||| || || ||||||||||| | | ||| | || ||| Sbjct 32312 AGAACTAAATGAAGGGTTGACTCCTTCTGAATGTTGTAATCAGAGAGAGTGCGTCCGTCT 32371 Query 151953 TCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCT 152012 |||| ||| || || || || | |||||||| |||| | || ||||| || || Sbjct 32372 TCTAACTGTTTGCCCGCAAATATCAATCTCTGCTGATCCGGAGGAATGCCTTCTTTGTCC 32431 Query 152013 TGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTT 152072 ||||| ||| || ||| | || | |||| || ||| || |||||||| ||||| Sbjct 32432 TGAATCTTTGCCTTTACATTTTCGATAGTGTCAGAGGGCTCGACCTCAAGAGTGATAGTC 32491 Query 152073 TTGCCCGTGAGAGTCTTCACGAAGACCTGCATTTT 152107 || || ||||| || ||||| || | |||||||| Sbjct 32492 TTTCCGGTGAGGGTTTTCACAAATATTTGCATTTT 32526 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1152987833327495