Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Achipteria_20coleoptrata_20[genbank_20GCA_5F000988765.1_202015-05- 06] 56,345 sequences; 88,443,889 total letters Query= NC_033775.1 Length=376207 Score E Sequences producing significant alignments: (Bits) Value seq17432 174 4e-38 seq669 159 8e-34 seq214 138 3e-27 seq7991 84.2 5e-11 >seq17432 Length=31749 Score = 174 bits (192), Expect = 4e-38 Identities = 165/210 (79%), Gaps = 3/210 (1%) Strand=Plus/Plus Query 177915 AAAATGCTCCAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAA 177974 ||||||| |||||||||||||||| | || |||||||| || ||||| |||||||| Sbjct 23743 AAAATGC---AAATTTTCGTGAAAACGTTGACCGGAAAAACCATTACCCTTGAGGTGGAG 23799 Query 177975 AGCTCAGACACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCG 178034 ||| |||||||| |||||||| || ||||||||||||||||| || |||||||| Sbjct 23800 CCCTCCGACACCATTGAGAACGTGAAGGCCAAGATTCAGGACAAAGAGGGCATCCCTCCC 23859 Query 178035 GACCAGCAACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGAT 178094 ||||| || |||| ||||| || || ||||| || ||||| || | ||||| ||||| Sbjct 23860 GACCAACAGAGACTGATCTTTGCGGGCAAACAACTAGAAGACGGCCGCACTCTCTCCGAT 23919 Query 178095 TATAACGTCCAAAAAGAATCAACACTGCAT 178124 || ||| | ||||| || ||||| || ||| Sbjct 23920 TACAACATTCAAAAGGAGTCAACCCTTCAT 23949 Score = 168 bits (186), Expect = 2e-36 Identities = 158/201 (79%), Gaps = 0/201 (0%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 ||||| || || || ||||| || |||||||| || ||||| |||||||| ||| ||| Sbjct 24369 CAAATCTTTGTTAAGACTCTGACCGGAAAAACCATAACCCTTGAGGTGGAGCCCTCCGAC 24428 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 ||||| |||||||| || || || || || |||||||| |||||||| ||||| ||| Sbjct 24429 ACCATTGAGAACGTTAAGGCCAAAATCCAAGATAAAGAAGGCATCCCTCCCGACCAACAA 24488 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 |||| ||||||||||| |||||| | ||||| || | |||||| ||||||||||| | Sbjct 24489 AGACTGATCTTCGCCGGCAAACAGTTGGAAGACGGGCGCACTCTTTCCGATTATAACATT 24548 Query 178104 CAAAAAGAATCAACACTGCAT 178124 ||||| || || || || ||| Sbjct 24549 CAAAAGGAGTCGACCCTTCAT 24569 Score = 152 bits (168), Expect = 1e-31 Identities = 165/219 (75%), Gaps = 0/219 (0%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 ||||| |||||||| || | || ||||| || ||||| | || ||||| || ||| Sbjct 24825 CAAATATTCGTGAAGACATTGACCGGAAAGACCATCACTTTGGAAGTGGAGCCGTCGGAC 24884 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 ||||||||||| || || |||||||| ||||||||||| || |||||||| |||||| Sbjct 24885 ACCATCGAGAATGTAAAGGCTAAGATTCAAGACAAAGAAGGGATTCCTCCGGATCAGCAA 24944 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 ||| | |||||||| || ||||| || ||||| || | |||||| |||| || || | Sbjct 24945 CGATTGATCTTCGCTGGCAAACAACTGGAAGACGGGCGCACTCTTTCCGACTACAATATT 25004 Query 178104 CAAAAAGAATCAACACTGCATCTTGTTTTGAGACTCAGA 178142 ||||| || || || || ||| | || | |||||||| Sbjct 25005 CAAAAGGAGTCGACCCTTCATTTGGTGCTTCGACTCAGA 25043 Score = 132 bits (146), Expect = 1e-25 Identities = 150/201 (75%), Gaps = 0/201 (0%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 ||||| ||||| ||||| | || ||||| || ||||| | || ||||| || ||| Sbjct 24597 CAAATATTCGTCAAAACATTGACCGGAAAGACCATCACTTTGGAAGTGGAGCCGTCGGAC 24656 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 ||||| |||||||| || || |||||||||||||| || || |||||||| || || Sbjct 24657 ACCATTGAGAACGTGAAGGCGAAAATTCAGGACAAAGAGGGTATTCCTCCGGATCAACAG 24716 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || |||||||||||||| ||||| || ||||| || | || || | || ||||| | Sbjct 24717 CGTCTTATCTTCGCCGGCAAACAACTAGAAGACGGCCGAACACTCTCTGACTATAATATT 24776 Query 178104 CAAAAAGAATCAACACTGCAT 178124 ||||| || || || || ||| Sbjct 24777 CAAAAGGAGTCGACTCTTCAT 24797 Score = 114 bits (126), Expect = 3e-20 Identities = 146/201 (73%), Gaps = 0/201 (0%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || || ||||| || ||||| || ||||| || || || | || ||||| || ||| Sbjct 24141 CAGATATTCGTCAAGACTCTGACCGGAAAGACAATTACTTTGGAAGTGGAGCCGTCGGAC 24200 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 ||||| |||||||| || || || || ||||||||||| || |||||||| || || Sbjct 24201 ACCATTGAGAACGTAAAGGCCAAAATCCAAGACAAAGAAGGTATTCCTCCGGATCAACAG 24260 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 |||| ||||| || || ||||| || ||||| || | || || | |||||||| | Sbjct 24261 AGACTGATCTTTGCGGGCAAACAACTAGAAGACGGCCGAACACTCTCTGATTATAATATT 24320 Query 178104 CAAAAAGAATCAACACTGCAT 178124 ||||| || || || || ||| Sbjct 24321 CAAAAGGAGTCGACTCTTCAT 24341 >seq669 Length=42814 Score = 159 bits (176), Expect = 8e-34 Identities = 156/201 (78%), Gaps = 0/201 (0%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 ||||| ||||||||||| ||||| ||||| || || || | || ||||| ||| || Sbjct 32066 CAAATATTCGTGAAAACCCTCACCGGAAAGACAATTACTTTGGAAGTGGAGGCCTCCGAT 32007 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 |||||||| ||||| || ||||||||||||||| ||||| || |||||||| || || Sbjct 32006 ACCATCGAAAACGTTAAGGCAAAGATTCAGGACAAGGAAGGCATTCCTCCGGATCAACAG 31947 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 |||||||||| || || |||||| | || || || | ||||| | ||||| ||| || Sbjct 31946 AGACTTATCTTTGCGGGCAAACAGTTAGAGGACGGCCGCACTCTCTCTGATTACAACATC 31887 Query 178104 CAAAAAGAATCAACACTGCAT 178124 |||||||| ||||| || ||| Sbjct 31886 CAAAAAGAGTCAACCCTTCAT 31866 Score = 154 bits (170), Expect = 4e-32 Identities = 164/216 (76%), Gaps = 3/216 (1%) Strand=Plus/Minus Query 177915 AAAATGCTCCAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAA 177974 ||||||| |||| || |||||||| ||||| ||||| || ||||| || ||||| || Sbjct 32526 AAAATGC---AAATATTTGTGAAAACCCTCACCGGAAAGACTATCACTCTTGAGGTCGAG 32470 Query 177975 AGCTCAGACACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCG 178034 ||| ||||| ||||| || || || ||||||||||||||||||||| || |||||| Sbjct 32469 CCCTCTGACACTATCGAAAATGTAAAGGCAAAGATTCAGGACAAAGAAGGCATTCCTCCG 32410 Query 178035 GACCAGCAACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGAT 178094 || ||||| || | || || || || |||||| | ||||| ||| | ||||| | ||| Sbjct 32409 GATCAGCAGAGATTGATATTTGCGGGCAAACAGTTAGAAGACGGACGCACTCTCTCTGAT 32350 Query 178095 TATAACGTCCAAAAAGAATCAACACTGCATCTTGTT 178130 || ||| | || || || ||||| || ||| | ||| Sbjct 32349 TACAACATTCAGAAGGAGTCAACCCTTCATTTAGTT 32314 Score = 131 bits (144), Expect = 4e-25 Identities = 153/207 (74%), Gaps = 0/207 (0%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || || |||||||| || ||||| ||||| || || || | || ||||| || || Sbjct 31838 CAGATATTCGTGAAGACCCTCACCGGAAAGACCATTACTTTGGAAGTGGAGGCTTCGGAT 31779 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 |||||||| ||||| || ||||||||||||||| ||||| || |||||||| || || Sbjct 31778 ACCATCGAAAACGTGAAGGCAAAGATTCAGGACAAGGAAGGTATTCCTCCGGATCAACAG 31719 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 |||||||||| || || |||||| | || || || | ||||| | ||||| ||| | Sbjct 31718 AGACTTATCTTTGCGGGCAAACAGTTAGAGGACGGCCGCACTCTCTCTGATTACAACATT 31659 Query 178104 CAAAAAGAATCAACACTGCATCTTGTT 178130 || || || || || || ||| | ||| Sbjct 31658 CAGAAGGAGTCGACTCTCCATTTGGTT 31632 Score = 100 bits (110), Expect = 7e-16 Identities = 99/128 (77%), Gaps = 0/128 (0%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || || ||||||||||| ||||| ||||| || || || | || ||||| ||| ||| Sbjct 32292 CAGATATTCGTGAAAACCCTCACCGGAAAGACAATTACTTTGGAAGTGGAGGCCTCCGAC 32233 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 |||||||| ||||| || ||||||||||||||| ||||| || ||||| || || || Sbjct 32232 ACCATCGAAAACGTTAAGGCAAAGATTCAGGACAAGGAAGGCATTCCTCCCGATCAACAG 32173 Query 178044 CGACTTAT 178051 |||| || Sbjct 32172 AGACTGAT 32165 >seq214 Length=17119 Score = 138 bits (152), Expect = 3e-27 Identities = 170/230 (74%), Gaps = 7/230 (3%) Strand=Plus/Minus Query 177915 AAAATGCTCCAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAA 177974 ||||||| |||| ||||| || || | || || || || ||||| || |||||||| Sbjct 1185 AAAATGC---AAATCTTCGTCAAGACGTTGACGGGTAAGACCATCACTCTTGAGGTGGA- 1130 Query 177975 AGCTCAG--ACACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTC 178032 || ||| | || || ||||| || || ||||||||||||||| || || || |||| Sbjct 1129 -GCCCAGCGATACTATTGAGAATGTAAAGGCAAAGATTCAGGACAAGGAGGGCATACCTC 1071 Query 178033 CGGACCAGCAACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCG 178092 |||| ||||| || | ||||| || || ||||| | ||||| || || |||||| || Sbjct 1070 CGGATCAGCAGCGGTTGATCTTTGCTGGCAAACAATTAGAAGACGGCAGAACTCTTAGCG 1011 Query 178093 ATTATAACGTCCAAAAAGAATCAACACTGCATCTTGTTTTGAGACTCAGA 178142 |||| ||| ||||||| || || || || ||| | || ||||||| ||| Sbjct 1010 ATTACAACATCCAAAAGGAGTCGACCCTTCATTTGGTGCTGAGACTGAGA 961 >seq7991 Length=30508 Score = 84.2 bits (92), Expect = 5e-11 Identities = 79/101 (78%), Gaps = 0/101 (0%) Strand=Plus/Minus Query 254447 ATGAAGCATTGGGTTGCGTTCTCTGCGACTTTTCTCAAATAGTTGTGTCTTTTTTCTTTT 254506 |||||| ||| || || ||||| ||||| |||| ||| ||||||| |||||| || Sbjct 16402 ATGAAGAGTTGTGTCGCCACTTCTGCCACTTTCCTCACATAATTGTGTCGTTTTTCCATT 16343 Query 254507 CGAAGTCTTTCGAACCGGAGGGCTGACTGTCCTCCTCGACC 254547 ||||| | |||| |||||||||||||||||||| || || Sbjct 16342 CGAAGCCGAGCGAAACGGAGGGCTGACTGTCCTCCACGTCC 16302 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1202862201995930