Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acromyrmex_20echinatior_20[refseq_20GCF_5F000204515.1_202011-05-03] 4,339 sequences; 295,944,863 total letters Query= NC_001350.1 Length=112930 Score E Sequences producing significant alignments: (Bits) Value seq4330 122 6e-23 >seq4330 Length=3992391 Score = 122 bits (134), Expect = 6e-23 Identities = 166/232 (72%), Gaps = 0/232 (0%) Strand=Plus/Plus Query 102033 CTTTATATTCTGCTCCGAAATGCCTCCACTGAAATCCATACACAGGTCCAAGATCTCCTT 102092 |||||||||| || || || |||| |||||| || ||||| |||||||| | ||| || | Sbjct 1172076 CTTTATATTCAGCACCAAAGTGCCGCCACTGGAAACCATAGACAGGTCCCAAATCACCCT 1172135 Query 102093 CATCTCTGTCATAAAAACCAAGTTTATCTAAAAATGATCTAGATCCATTCGCATCCCAAA 102152 | ||||||||| || || ||| || || | | || ||||| ||||||||| Sbjct 1172136 CCTCTCTGTCAGTGAAGTCACAGGAATCCAAGAAAGCCCGTGAACCATTTTCATCCCAAA 1172195 Query 102153 TGTGCACGCCAGCTGCTGATAGCTCTTTGCTGTCAGTAGATCCTCTGATAAACCACAACA 102212 |||| | || | |||| |||||| | || |||||| ||||||||||||| | Sbjct 1172196 TGTGAATACCTTTATCCGATAATTCTTTGGAATTTGTCGATCCTTTGATAAACCACAATA 1172255 Query 102213 GTTCTTCAACAACACCTCTCCAAAATACTCTCTTAGTAGTTAAAAGTGGAAA 102264 ||||||||| || ||| ||| |||||| ||||| || | | |||||| Sbjct 1172256 GTTCTTCAATCACCGCTCGCCAGAATACTTGTTTAGTTGTCAGTAATGGAAA 1172307 Score = 91.5 bits (100), Expect = 1e-13 Identities = 121/168 (72%), Gaps = 0/168 (0%) Strand=Plus/Plus Query 101752 AGTGACATGAGCAATCATGCAAGTTAAAAGAGAATAGCTAGCAATGTTAAATGGCACTCC 101811 ||| |||||||| |||||| |||| | | |||||| || |||||||| |||||||| Sbjct 1171683 AGTAACATGAGCGATCATGTAAGTCAGCAAAGAATATGACGCTATGTTAAACGGCACTCC 1171742 Query 101812 TAACCCCATATCAGCTGATCTTTGATACAGTTGACAGGAAAGCTTTCCATCACAGACATA 101871 ||| ||||| || || ||||||||| ||||| ||| | | ||| | | || || Sbjct 1171743 TAAACCCATGTCTGCGCTTCTTTGATAAAGTTGCGTGGACAATTCTCCGTTATTTACGTA 1171802 Query 101872 AAATTGACTTAATACATGACAAGGCGGCAACACCATTTTAGGAATGTC 101919 |||||| || ||||| |||||||| |||| || ||||| || Sbjct 1171803 AAATTGTACCAAAGTGTGACACGGCGGCAATGCCATCTTTGGAATATC 1171850 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 361232096472089