Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acromyrmex_20echinatior_20[refseq_20GCF_5F000204515.1_202011-05-03] 4,339 sequences; 295,944,863 total letters Query= NC_002593.1 Length=100999 Score E Sequences producing significant alignments: (Bits) Value seq3660 107 1e-18 seq3806 87.8 1e-12 seq3043 86.0 4e-12 >seq3660 Length=1598725 Score = 107 bits (118), Expect = 1e-18 Identities = 162/228 (71%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 34163 CCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGAC 34222 || ||||| ||||||| |||| || || || ||| ||||| || |||||||| || Sbjct 289967 CCACCGCGAAGCCTCAAAACCAAATGCAATGTGGATTCCTTCTGAATATTGTAGTCAGAA 290026 Query 34223 AGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGC 34282 || ||| |||| || | || || || ||||| || | || |||||| || || Sbjct 290027 AGTGTACGCCCGTCTTCAAGTTGTTTTCCGGCGAAGATCAACCTCTGCTGATCCGGTGGG 290086 Query 34283 ACGCTCTCCTTGTCGGCTATCTTTTGCTTT-AGATCGGCTATCGAATCGGTCGATTCGAC 34341 | | |||||||| || ||| ||||| | || | |||| ||| | | |||||| Sbjct 290087 ATACCTTCCTTGTCCTGAAT-TTTAGCTTTGACATTCTCGATCGTATCTGAAGCTTCGAC 290145 Query 34342 GTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389 |||| |||||| ||||| || ||||||||||| ||||| |||||||| Sbjct 290146 CTCCAGCGTGATAGTTTTACCAGTGAGAGTTTTGACAAAAATCTGCAT 290193 Score = 86.0 bits (94), Expect = 4e-12 Identities = 134/192 (70%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 34198 TTCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAA 34257 ||||||||| || |||||||| || ||| |||| |||| || | || || || ||||| Sbjct 290914 TTCTTTCTGAATATTGTAGTCAGAAAGCGTACGGCCGTCTTCAAGTTGTTTTCCAGCGAA 290973 Query 34258 AATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATC 34317 || | | |||||| || ||| | | || ||||| || || ||| | || Sbjct 290974 GATCAATCTCTGCTGATCTGGGGGGATTCCTTCTTTGTCTTGAATTTTGGCCTTGACATT 291033 Query 34318 GGCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCAC 34377 | |||| || | || || || |||| ||||||||| || || || || ||||| || Sbjct 291034 CTCGATCGTGTCTGACGCCTCAACTTCCAACGTGATGGTCTTTCCTGTCAGGGTTTTGAC 291093 Query 34378 AAAGATCTGCAT 34389 |||||||||||| Sbjct 291094 AAAGATCTGCAT 291105 >seq3806 Length=402996 Score = 87.8 bits (96), Expect = 1e-12 Identities = 156/228 (68%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 34162 TCCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGA 34221 ||| || || || | ||| ||||| || | || ||| ||||| ||||| ||||| || Sbjct 2778 TCCTCCTCGAAGACGCAGAACCAGATGAAGCGTGGATTCCTTCTGGATGTTATAGTCTGA 2719 Query 34222 CAGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGG 34281 || | | || |||||||| || || || || || | || |||||||| || Sbjct 2718 AAGTGTCCTACCATCTTCCAACTGTTTACCAGCAAAGATCAATCGTTGCTGGTCAGGAGG 2659 Query 34282 CACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGAC 34341 | || || ||||| ||||| |||| | |||| | ||| | | ||| || Sbjct 2658 AATGCCTTCTTTGTCTTGGATCTTAGCTTTTACGTTTTCTATTGTATCAGAGGCTTCAAC 2599 Query 34342 GTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389 || | ||||||||||| ||||||||||||||||| ||||| ||||| Sbjct 2598 TTCAAGAGTGATGGTTTTACCGGTGAGAGTTTTCACGAAGATTTGCAT 2551 Score = 82.4 bits (90), Expect = 5e-11 Identities = 155/228 (68%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 34162 TCCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGA 34221 ||| || || || | ||| |||| || | ||| |||||| || ||||| ||||| || Sbjct 3006 TCCTCCTCGAAGACGCAGAACCAAATGAAGGGTAGATTCTTTTTGAATGTTATAGTCCGA 2947 Query 34222 CAGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGG 34281 || | |||| ||||| || || || || ||||| | || |||||||| || Sbjct 2946 GAGTGTCCTACCGTCTTCCAATTGTTTACCAGCAAAAATCAAACGTTGCTGGTCAGGAGG 2887 Query 34282 CACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGAC 34341 | || || ||||| ||||| |||| | |||| | || | | ||| || Sbjct 2886 AATGCCTTCTTTGTCTTGGATCTTAGCTTTTACGTTTTCTATTGTGTCAGAGGCTTCAAC 2827 Query 34342 GTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389 || | ||||||||||| ||||| ||||||||||| ||||| ||||| Sbjct 2826 TTCAAGAGTGATGGTTTTACCGGTAAGAGTTTTCACGAAGATTTGCAT 2779 >seq3043 Length=1629123 Score = 86.0 bits (94), Expect = 4e-12 Identities = 133/190 (70%), Gaps = 0/190 (0%) Strand=Plus/Minus Query 34200 CTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAA 34259 |||| || |||||||| ||||||| || | || |||| ||| ||||| ||||| | Sbjct 1068045 CTTTTTGGATGTTGTAATCGGACAAAGTGCGTCCATCCTCCAGCTGTTTGCCGGCGAAGA 1067986 Query 34260 TGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCGG 34319 |||| ||||| || || || | | ||||||||| ||||| ||| | || Sbjct 1067985 TGAGTCGCTGTTGATCTGGCGGAATTCCCTCCTTGTCCTGGATCTTAGCCTTGACATTCT 1067926 Query 34320 CTATCGAATCGGTCGATTCGACGTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAA 34379 | || | ||| | | || || || | || |||||||| || ||||| |||||||| | Sbjct 1067925 CGATAGTATCAGAGGCCTCTACCTCGAGGGTAATGGTTTTACCCGTGAGGGTTTTCACGA 1067866 Query 34380 AGATCTGCAT 34389 |||||||||| Sbjct 1067865 AGATCTGCAT 1067856 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 323054915447840