Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acromyrmex_20echinatior_20[refseq_20GCF_5F000204515.1_202011-05-03] 4,339 sequences; 295,944,863 total letters Query= NC_002642.1 Length=144575 Score E Sequences producing significant alignments: (Bits) Value seq3973 82.4 7e-11 >seq3973 Length=340871 Score = 82.4 bits (90), Expect = 7e-11 Identities = 127/178 (71%), Gaps = 4/178 (2%) Strand=Plus/Plus Query 16487 TTTTCTTTGCTATCTAAAATATAAGTATCTATTAGTAAACTATACATTTCTGAATGAATA 16546 |||||||| ||| |||||||||| || || || ||| ||||| || ||||||||| Sbjct 290 TTTTCTTTTGGATCAGAAATATAAGTTTCAATGAGCAAAGAGTACATCTCAGAATGAATA 349 Query 16547 TTCTCCATTGCTATCTGAAAACCATAAAAGCATCTAGCTTCGGATATTTGTACTTCAGAG 16606 || || || || || ||||| ||||| || || | ||||||| |||| ||||| | Sbjct 350 TTTTCTATGGCAATTTGAAAGCCATAGAAACAACGTGCTTCGGGAATTTTCACTTCTTGG 409 Query 16607 TAAAACCTTTCT-GCTAAG-TTTTCGTTAACTATTCCATCGCTAGCTGCAAAAAACGC 16662 || ||||| | || || || ||||| || |||||| ||| ||||| || || Sbjct 410 CTGAA--TTTCTCAATCAGATTCTCATTAACGATACCATCGGAAGCGGCAAAGAATGC 465 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 462486914505400