Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acromyrmex_20echinatior_20[refseq_20GCF_5F000204515.1_202011-05-03] 4,339 sequences; 295,944,863 total letters Query= NC_003027.1 Length=150773 Score E Sequences producing significant alignments: (Bits) Value seq3093 93.3 4e-14 seq2857 82.4 7e-11 >seq3093 Length=1183124 Score = 93.3 bits (102), Expect = 4e-14 Identities = 99/128 (77%), Gaps = 2/128 (2%) Strand=Plus/Plus Query 140209 AATATACCGTACACTAGAGTAAACCATACAAAATACATGGTTACTGATAAAGTTGCATAT 140268 || ||||| ||| | ||||||||||| | |||||||||||||||||| || |||||| Sbjct 341172 AAAATACCCTACGCGAGAGTAAACCACAATAAATACATGGTTACTGATGTAGCAGCATAT 341231 Query 140269 GTGGGCACGTCAAATTGGTCAGGTAATTATTTTACTGATACCTGTGG-AGTTTCATT-AA 140326 || || ||| |||||||| ||| ||||||||| ||| || ||| | |||||| || Sbjct 341232 GTCGGAACGAGTAATTGGTCGGGTGATTATTTTATTGACACAGCTGGTAAGTTCATTCAA 341291 Query 140327 ATATAATT 140334 || | ||| Sbjct 341292 ATGTCATT 341299 >seq2857 Length=5407 Score = 82.4 bits (90), Expect = 7e-11 Identities = 146/211 (69%), Gaps = 4/211 (2%) Strand=Plus/Plus Query 14240 ATAAGTTCGTTTGAAAATGTTAATCCTGGCATCAATCCTCGtttttttAACCAAAATATT 14299 ||||||||||| || || | |||||||| | ||||||||| |||| |||||| || Sbjct 4642 ATAAGTTCGTTGCTGAAGGTGAGACCTGGCATGACTCCTCGTTTCTTTAGCCAAAAAATG 4701 Query 14300 GCAGCGAATGATCCGGAAAAGAATATTCCCTCAACTGCAGCAAACGCTATTAATCGTTCT 14359 || ||||| || ||||| || |||||||| || ||||| || | || ||||| Sbjct 4702 GCTGCGAAACTGCCACTGAAGAAGATACCCTCAACCGCCGCAAATGCGACTACACGTTCG 4761 Query 14360 CCAAACGATGCTTTTTTGTTCGAT--ATCCATTTTCTAGCCCATTCAGAtttttttttAA 14417 ||||| || | | || ||| ||||| ||| ||||| | || || || | | Sbjct 4762 GGAAACGTAGCACTCTCGT--GATTGATCCAATTTAATGCCCAATTAGCCTTCTTCCTCA 4819 Query 14418 TAAAATCCATTGTTTCAATAGCATTAAATAA 14448 | || | ||| ||||| ||||||||||| Sbjct 4820 CACAAGGAAGTGTCTCAATCGCATTAAATAA 4850 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 482319438780520