Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acromyrmex_20echinatior_20[refseq_20GCF_5F000204515.1_202011-05-03] 4,339 sequences; 295,944,863 total letters Query= NC_004003.1 Length=149599 Score E Sequences producing significant alignments: (Bits) Value seq3093 89.7 5e-13 >seq3093 Length=1183124 Score = 89.7 bits (98), Expect = 5e-13 Identities = 98/128 (77%), Gaps = 2/128 (2%) Strand=Plus/Plus Query 139324 AATATACCGTACACTAGAGTAAACCATACAAAATACATGGTTACTGATAAAGTTGCATAT 139383 || ||||| ||| | ||||||||||| | |||||||||||||||||| || |||||| Sbjct 341172 AAAATACCCTACGCGAGAGTAAACCACAATAAATACATGGTTACTGATGTAGCAGCATAT 341231 Query 139384 GTGGGTACGTCAAATTGGTTAGGTAATTATTTTAATGATACCTGTGG-AGTTTCATT-AA 139441 || || ||| ||||||| ||| ||||||||| ||| || ||| | |||||| || Sbjct 341232 GTCGGAACGAGTAATTGGTCGGGTGATTATTTTATTGACACAGCTGGTAAGTTCATTCAA 341291 Query 139442 ATATAATT 139449 || | ||| Sbjct 341292 ATGTCATT 341299 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 478562842539960