Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acromyrmex_20echinatior_20[refseq_20GCF_5F000204515.1_202011-05-03] 4,339 sequences; 295,944,863 total letters Query= NC_005068.1 Length=110907 Score E Sequences producing significant alignments: (Bits) Value seq3806 91.5 1e-13 >seq3806 Length=402996 Score = 91.5 bits (100), Expect = 1e-13 Identities = 149/211 (71%), Gaps = 4/211 (2%) Strand=Plus/Minus Query 43913 ACCAAATGTAGCGTGCTCTCTTTTTGAATATTATAATCGTTTAATTGACGCT--CATCGT 43970 |||| ||| |||||| || || || || ||||| || | || || | || |||| | Sbjct 2759 ACCAGATGAAGCGTGGATTCCTTCTGGATGTTATAGTC-TGAAAGTGTC-CTACCATCTT 2702 Query 43971 CCAATTGTTTTCCTGCAAATATCAACCGTTGCTGGTCCTGAGGTACACCTTCTTTATCTG 44030 |||| ||||| || ||||| ||||| ||||||||||| |||| | |||||||| ||| Sbjct 2701 CCAACTGTTTACCAGCAAAGATCAATCGTTGCTGGTCAGGAGGAATGCCTTCTTTGTCTT 2642 Query 44031 AAATTTTTTGTTTGACCATAGCAACAGTATCTGCCGGCTCCACATCGACCGTAATTGTTT 44090 || || ||| || | | | ||||| | | || || || | || || |||| Sbjct 2641 GGATCTTAGCTTTTACGTTTTCTATTGTATCAGAGGCTTCAACTTCAAGAGTGATGGTTT 2582 Query 44091 TACCGGTTAAAGTCTTCACAAATATTTGCAT 44121 ||||||| | ||| ||||| || |||||||| Sbjct 2581 TACCGGTGAGAGTTTTCACGAAGATTTGCAT 2551 Score = 89.7 bits (98), Expect = 4e-13 Identities = 145/209 (69%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 43913 ACCAAATGTAGCGTGCTCTCTTTTTGAATATTATAATCGTTTAATTGACGCTCATCGTCC 43972 |||||||| || || ||||||||||| ||||| || | | | | || ||| Sbjct 2987 ACCAAATGAAGGGTAGATTCTTTTTGAATGTTATAGTCCGAGAGTGTCCTACCGTCTTCC 2928 Query 43973 AATTGTTTTCCTGCAAATATCAACCGTTGCTGGTCCTGAGGTACACCTTCTTTATCTGAA 44032 |||||||| || ||||| ||||| ||||||||||| |||| | |||||||| ||| Sbjct 2927 AATTGTTTACCAGCAAAAATCAAACGTTGCTGGTCAGGAGGAATGCCTTCTTTGTCTTGG 2868 Query 44033 ATTTTTTGTTTGACCATAGCAACAGTATCTGCCGGCTCCACATCGACCGTAATTGTTTTA 44092 || || ||| || | | | || || | | || || || | || || |||||| Sbjct 2867 ATCTTAGCTTTTACGTTTTCTATTGTGTCAGAGGCTTCAACTTCAAGAGTGATGGTTTTA 2808 Query 44093 CCGGTTAAAGTCTTCACAAATATTTGCAT 44121 ||||| | ||| ||||| || |||||||| Sbjct 2807 CCGGTAAGAGTTTTCACGAAGATTTGCAT 2779 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 354758838806172